CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021990.1-P	Field mustard	cytosol	79.39	99.45
CDX77611	Canola	cytosol	75.0	99.42
CDY00582	Canola	cytosol	75.0	99.42
CDY23103	Canola	cytosol	75.0	99.42
CDY60533	Canola	cytosol	75.0	99.42
CDX78887	Canola	cytosol	74.56	98.84
CDY39447	Canola	cytosol	74.56	98.84
CDY62552	Canola	cytosol	74.56	98.84
AT5G45775.2	Thale cress	cytosol	78.51	98.35
CDY64920	Canola	cytosol	78.51	97.81
CDX99436	Canola	cytosol, extracellular	78.51	97.28
KRH25821	Soybean	cytosol	75.44	95.03
KRH62493	Soybean	endoplasmic reticulum, nucleus	75.44	95.03
KRH56423	Soybean	cytosol	75.44	95.03
KRH55704	Soybean	cytosol	75.44	95.03
KRH13277	Soybean	cytosol	75.44	95.03
Solyc12g010930.1.1	Tomato	extracellular	75.0	94.48
Solyc10g007980.2.1	Tomato	cytosol	75.0	94.48
Solyc07g055230.2.1	Tomato	cytosol	75.0	94.48
Solyc02g086240.2.1	Tomato	cytosol	75.0	94.48
PGSC0003DMT400067873	Potato	cytosol	75.0	94.48
PGSC0003DMT400052643	Potato	cytosol	75.0	94.48
PGSC0003DMT400027379	Potato	cytosol	75.0	94.48
PGSC0003DMT400020315	Potato	cytosol	75.0	94.48
KRH55687	Soybean	nucleus	75.0	94.48
KRH25819	Soybean	nucleus	75.0	94.48
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	75.0	93.96
EES04817	Sorghum	cytosol	74.56	93.41
KXG29884	Sorghum	cytosol	74.56	93.41
EES04818	Sorghum	cytosol	74.56	93.41
CDY26360	Canola	plastid	92.54	92.95
Os05t0207300-01	Rice	plasma membrane	74.12	92.86
KXG31594	Sorghum	cytosol	73.68	92.31
Os01t0205500-01	Rice	nucleus	73.68	92.31
KRH62765	Soybean	cytosol	41.23	91.26
VIT_10s0003g01520.t01	Wine grape	cytosol	74.12	90.86
TraesCS1B01G144300.1	Wheat	cytosol	66.67	90.48
TraesCS3A01G136800.1	Wheat	cytosol	71.05	90.0
TraesCS3B01G154600.1	Wheat	cytosol	71.05	90.0
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	71.05	90.0
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	71.05	90.0
CDX98322	Canola	cytosol	57.02	89.66
TraesCS1A01G125100.1	Wheat	nucleus	70.18	88.89
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	69.74	88.33
EES17871	Sorghum	cytosol	29.82	87.18
Os06t0550000-00	Rice	plastid	74.12	84.92
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	79.82	83.87
KXG20149	Sorghum	cytosol	69.74	82.81
HORVU0Hr1G003140.1	Barley	mitochondrion	26.32	82.19
KRH56320	Soybean	cytosol, nucleus	71.05	81.41
GSMUA_Achr9P28800_001	Banana	cytosol	10.96	80.65
HORVU1Hr1G032650.1	Barley	mitochondrion	32.02	80.22
HORVU1Hr1G028820.1	Barley	mitochondrion	71.93	79.61
HORVU7Hr1G044560.1	Barley	mitochondrion	32.46	77.89
KRH16362	Soybean	mitochondrion	29.82	76.4
CDX71934	Canola	cytosol	82.02	73.33
CDY49245	Canola	cytosol	82.02	72.2
EES00248	Sorghum	cytosol, plastid, vacuole	15.35	71.43
Solyc04g080150.1.1	Tomato	unclear	30.26	70.41
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	25.88	61.46
KRH12095	Soybean	cytosol, plastid, vacuole	7.02	10.67
Zm00001d000159_P001	Maize	cytosol	1.75	8.33

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	GO:A0A078DH49	EnsemblPlants:CDX87764	ProteinID:CDX87764	ProteinID:CDX87764.1
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00146842001	InterPro:IPR022803	PFAM:PF00281	PFAM:PF00673
PIRSF:PIRSF002161	ScanProsite:PS00358	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C
InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282	UniParc:UPI0004EEA3EA	SEG:seg

Description

BnaC02g31850D

Coordinates

chrLK031851:+:1150510..1152135

Molecular Weight (calculated)

26258.2 Da

IEP (calculated)

10.706

GRAVY (calculated)

-0.334

Length

228 amino acids

Sequence
(BLAST)

001: MINKKVYIRG FTFRPLITHF SSHSTQLRFR NSLCFLSLRS IVDLLQMASE KKLSNPMRDI KVQKLVLNIS VGESGDRLTR ASKVLEQLSG QTPVFSKARY
101: TVRSFGIRRN EKIACYVTVR GDKAMQLLES GLKVKEYELL RKNFSDTGCF GFGIQEHIDL GIKYDPSTGI YGMDFYVVLE RPGYRVARRR RCKARVGIQH
201: RVTKDDAMKW FQVKYEGVIL NKSQNITG

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.