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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 1
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77611 Canola cytosol 66.41 100.0
CDY00582 Canola cytosol 66.41 100.0
CDY23103 Canola cytosol 66.41 100.0
CDY60533 Canola cytosol 66.41 100.0
AT2G42740.1 Thale cress cytosol 69.88 99.45
CDX78887 Canola cytosol 66.02 99.42
CDY39447 Canola cytosol 66.02 99.42
CDY62552 Canola cytosol 66.02 99.42
AT3G58700.1 Thale cress cytosol 69.5 98.9
CDY64920 Canola cytosol 69.5 98.36
CDX99436 Canola cytosol, extracellular 69.5 97.83
KRH25821 Soybean cytosol 66.8 95.58
KRH62493 Soybean endoplasmic reticulum, nucleus 66.8 95.58
KRH56423 Soybean cytosol 66.8 95.58
KRH55704 Soybean cytosol 66.8 95.58
KRH13277 Soybean cytosol 66.8 95.58
Solyc12g010930.1.1 Tomato extracellular 66.41 95.03
Solyc10g007980.2.1 Tomato cytosol 66.41 95.03
Solyc07g055230.2.1 Tomato cytosol 66.41 95.03
Solyc02g086240.2.1 Tomato cytosol 66.41 95.03
PGSC0003DMT400067873 Potato cytosol 66.41 95.03
PGSC0003DMT400052643 Potato cytosol 66.41 95.03
PGSC0003DMT400027379 Potato cytosol 66.41 95.03
PGSC0003DMT400020315 Potato cytosol 66.41 95.03
KRH55687 Soybean nucleus 66.41 95.03
KRH25819 Soybean nucleus 66.41 95.03
Os02t0235600-01 Rice cytosol, golgi, nucleus, plasma membrane 66.41 94.51
EES04817 Sorghum cytosol 66.02 93.96
KXG29884 Sorghum cytosol 66.02 93.96
EES04818 Sorghum cytosol 66.02 93.96
Os05t0207300-01 Rice plasma membrane 65.64 93.41
KXG31594 Sorghum cytosol 65.25 92.86
Os01t0205500-01 Rice nucleus 65.25 92.86
KRH62765 Soybean cytosol 36.68 92.23
VIT_10s0003g01520.t01 Wine grape cytosol 65.64 91.4
TraesCS1B01G144300.1 Wheat cytosol 59.07 91.07
TraesCS3D01G137600.1 Wheat cytosol, extracellular, golgi 62.93 90.56
TraesCS3B01G154600.1 Wheat cytosol 62.93 90.56
TraesCS3A01G136800.1 Wheat cytosol 62.93 90.56
HORVU3Hr1G026060.1 Barley cytosol, plasma membrane 62.93 90.56
CDX98322 Canola cytosol 50.58 90.34
CDX88999 Canola endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 75.29 89.86
TraesCS1A01G125100.1 Wheat nucleus 62.16 89.44
TraesCS1D01G128800.1 Wheat cytosol, golgi, unclear 61.78 88.89
CDX71934 Canola cytosol 87.26 88.63
EES17871 Sorghum cytosol 26.64 88.46
Os06t0550000-00 Rice plastid 65.64 85.43
HORVU0Hr1G003140.1 Barley mitochondrion 23.55 83.56
KXG20149 Sorghum cytosol 61.78 83.33
CDY26360 Canola plastid 72.59 82.82
CDX87764 Canola mitochondrion 72.2 82.02
KRH56320 Soybean cytosol, nucleus 62.93 81.91
HORVU1Hr1G032650.1 Barley mitochondrion 28.57 81.32
GSMUA_Achr9P28800_001 Banana cytosol 9.65 80.65
HORVU7Hr1G044560.1 Barley mitochondrion 28.96 78.95
HORVU1Hr1G028820.1 Barley mitochondrion 62.16 78.16
KRH16362 Soybean mitochondrion 26.64 77.53
EES00248 Sorghum cytosol, plastid, vacuole 13.9 73.47
Solyc04g080150.1.1 Tomato unclear 26.64 70.41
HORVU7Hr1G062960.1 Barley cytosol, mitochondrion, plastid 22.78 61.46
KRH12095 Soybean cytosol, plastid, vacuole 6.18 10.67
Zm00001d000159_P001 Maize cytosol 1.54 8.33
Protein Annotations
MapMan:17.1.2.1.11Gene3D:3.30.1440.10GO:A0A078IEF7UniProt:A0A078IEF7EnsemblPlants:CDY49245ProteinID:CDY49245
ProteinID:CDY49245.1GO:GO:0003674GO:GO:0003735GO:GO:0005198GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00092635001InterPro:IPR022803PFAM:PF00281
PFAM:PF00673ScanProsite:PS00358PANTHER:PTHR11994PANTHER:PTHR11994:SF15InterPro:Ribosomal_L5InterPro:Ribosomal_L5_C
InterPro:Ribosomal_L5_CSInterPro:Ribosomal_L5_NInterPro:Ribosomal_L5_dom_sfSUPFAM:SSF55282UniParc:UPI0004EEF96CSEG:seg
Description
BnaA09g55240DBnaA09g55240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEF7]
Coordinates
chrLK032820:+:49868..51616
Molecular Weight (calculated)
29584.1 Da
IEP (calculated)
10.382
GRAVY (calculated)
-0.246
Length
259 amino acids
Sequence
(BLAST)
001: MILPLFLKIR NRFSSHEEER GLCWRKEGRV VISLLVILHF RTLDTLGFIY FGAASPLSLF DSSFPFPAGV LSQPESQMAS EKKLSNPMRD IKVQKLVLNI
101: SVGESGDRLT RASKVLEQLS GQTPVFSKAR YTVRSFGIRR NEKIACYVTV RGDKAMQLLE SGLKVKEYEL LRRNFSDTGC FGFGIQEHID LGIKYDPSTG
201: IYGMDFYVVL ERPGYRVARR RRCKARVGIQ HRVTKDDAMK WFQVKYEGVI LNKSQNITG
Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.