CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P28800_001	Banana	cytosol	4.0	19.35
VIT_03s0017g00140.t01	Wine grape	cytosol	10.67	15.84
EES00248	Sorghum	cytosol, plastid, vacuole	4.67	14.29
VIT_19s0014g02400.t01	Wine grape	cytosol	10.0	14.15
KRH16362	Soybean	mitochondrion	7.33	12.36
HORVU0Hr1G003140.1	Barley	mitochondrion	6.0	12.33
HORVU1Hr1G032650.1	Barley	mitochondrion	7.33	12.09
HORVU7Hr1G044560.1	Barley	mitochondrion	7.33	11.58
VIT_17s0053g00180.t01	Wine grape	cytosol	9.33	11.57
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	13.33	11.11
TraesCS1A01G125100.1	Wheat	nucleus	13.33	11.11
TraesCS1B01G144300.1	Wheat	cytosol	12.0	10.71
CDX98322	Canola	cytosol	10.0	10.34
EES17871	Sorghum	cytosol	5.33	10.26
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	12.0	10.0
TraesCS3A01G136800.1	Wheat	cytosol	12.0	10.0
TraesCS3B01G154600.1	Wheat	cytosol	12.0	10.0
KRH55704	Soybean	cytosol	12.0	9.94
KRH55687	Soybean	nucleus	12.0	9.94
KRH25821	Soybean	cytosol	12.0	9.94
KRH25819	Soybean	nucleus	12.0	9.94
KRH56423	Soybean	cytosol	12.0	9.94
KRH13277	Soybean	cytosol	12.0	9.94
KRH62493	Soybean	endoplasmic reticulum, nucleus	12.0	9.94
KXG29884	Sorghum	cytosol	12.0	9.89
KXG31594	Sorghum	cytosol	12.0	9.89
EES04818	Sorghum	cytosol	12.0	9.89
EES04817	Sorghum	cytosol	12.0	9.89
HORVU1Hr1G028820.1	Barley	mitochondrion	13.33	9.71
Bra017591.1-P	Field mustard	cytosol	11.33	9.55
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	11.33	9.44
PGSC0003DMT400052643	Potato	cytosol	11.33	9.39
PGSC0003DMT400067873	Potato	cytosol	11.33	9.39
PGSC0003DMT400027379	Potato	cytosol	11.33	9.39
Solyc02g086240.2.1	Tomato	cytosol	11.33	9.39
Solyc12g010930.1.1	Tomato	extracellular	11.33	9.39
PGSC0003DMT400020315	Potato	cytosol	11.33	9.39
Solyc07g055230.2.1	Tomato	cytosol	11.33	9.39
Solyc10g007980.2.1	Tomato	cytosol	11.33	9.39
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	11.33	9.34
Os01t0205500-01	Rice	nucleus	11.33	9.34
Os05t0207300-01	Rice	plasma membrane	11.33	9.34
CDY00582	Canola	cytosol	10.67	9.3
CDY23103	Canola	cytosol	10.67	9.3
CDX78887	Canola	cytosol	10.67	9.3
CDY39447	Canola	cytosol	10.67	9.3
CDX77611	Canola	cytosol	10.67	9.3
CDY60533	Canola	cytosol	10.67	9.3
CDY62552	Canola	cytosol	10.67	9.3
KXG20149	Sorghum	cytosol	11.33	8.85
AT3G58700.1	Thale cress	cytosol	10.67	8.79
AT2G42740.1	Thale cress	cytosol	10.67	8.79
AT4G18730.1	Thale cress	cytosol	10.67	8.79
AT5G45775.2	Thale cress	cytosol	10.67	8.79
Bra012580.1-P	Field mustard	cytosol	10.67	8.79
Bra013342.1-P	Field mustard	cytosol	10.67	8.79
Bra021990.1-P	Field mustard	cytosol	10.67	8.79
Bra025058.1-P	Field mustard	cytosol	10.67	8.79
CDY64920	Canola	cytosol	10.67	8.74
KRH62765	Soybean	cytosol	6.0	8.74
CDX99436	Canola	cytosol, extracellular	10.67	8.7
Os06t0550000-00	Rice	plastid	11.33	8.54
KRH56320	Soybean	cytosol, nucleus	11.33	8.54
Zm00001d000159_P001	Maize	cytosol	2.67	8.33
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	10.67	7.37
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	10.67	7.37
CDY26360	Canola	plastid	10.67	7.05
CDX87764	Canola	mitochondrion	10.67	7.02
CDX71934	Canola	cytosol	10.67	6.27
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	4.0	6.25
CDY49245	Canola	cytosol	10.67	6.18
Solyc04g080150.1.1	Tomato	unclear	4.0	6.12

Protein Annotations

Gene3D:3.30.1440.10	MapMan:35.2	EMBL:ACUP02009265	EnsemblPlantsGene:GLYMA_15G151500	GO:GO:0000027	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538
GO:GO:0022625	InterPro:IPR022803	UniProt:K7MBG7	EnsemblPlants:KRH12095	ProteinID:KRH12095	ProteinID:KRH12095.1
PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_dom_sf	TMHMM:TMhelix	UniParc:UPI0002950E4F

Description

hypothetical protein

Coordinates

chr15:-:12557700..12567175

Molecular Weight (calculated)

17359.5 Da

IEP (calculated)

11.431

GRAVY (calculated)

-0.243

Length

150 amino acids

Sequence
(BLAST)

001: MNFHKSSHGA INVQRYSLDR FAEVLHCGIL TISITYLGVP VGINARKEDT WRIVIQKMQS KLTPWRQRHL SIRGRASEKK LSNPMREIKV QKLVLNISVS
101: ESGDHLTRAT KLGFDSKVHL FVPLGLEEMR RLHAMLLSKV TRRCNFWRVV

Best Arabidopsis Sequence Match ( AT3G58700.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.