CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04818	Sorghum	cytosol	100.0	100.0
EES04817	Sorghum	cytosol	100.0	100.0
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	97.8	97.8
KXG31594	Sorghum	cytosol	97.25	97.25
Zm00001d053547_P003	Maize	plastid	97.25	94.65
AT2G42740.1	Thale cress	cytosol	94.51	94.51
KRH13277	Soybean	cytosol	93.96	94.48
KRH62493	Soybean	endoplasmic reticulum, nucleus	93.96	94.48
KRH56423	Soybean	cytosol	93.96	94.48
KRH55704	Soybean	cytosol	93.96	94.48
KRH25821	Soybean	cytosol	93.96	94.48
CDX77611	Canola	cytosol	89.01	94.19
CDY60533	Canola	cytosol	89.01	94.19
CDY23103	Canola	cytosol	89.01	94.19
CDY00582	Canola	cytosol	89.01	94.19
Bra021990.1-P	Field mustard	cytosol	93.96	93.96
AT5G45775.2	Thale cress	cytosol	93.96	93.96
AT4G18730.1	Thale cress	cytosol	93.96	93.96
AT3G58700.1	Thale cress	cytosol	93.96	93.96
Solyc10g007980.2.1	Tomato	cytosol	93.41	93.92
Solyc07g055230.2.1	Tomato	cytosol	93.41	93.92
Solyc02g086240.2.1	Tomato	cytosol	93.41	93.92
PGSC0003DMT400067873	Potato	cytosol	93.41	93.92
Solyc12g010930.1.1	Tomato	extracellular	93.41	93.92
PGSC0003DMT400052643	Potato	cytosol	93.41	93.92
PGSC0003DMT400027379	Potato	cytosol	93.41	93.92
PGSC0003DMT400020315	Potato	cytosol	93.41	93.92
KRH55687	Soybean	nucleus	93.41	93.92
KRH25819	Soybean	nucleus	93.41	93.92
VIT_12s0028g01800.t01	Wine grape	cytosol	89.01	93.64
CDX78887	Canola	cytosol	88.46	93.6
CDY39447	Canola	cytosol	88.46	93.6
CDY62552	Canola	cytosol	88.46	93.6
Bra013342.1-P	Field mustard	cytosol	93.41	93.41
Bra012580.1-P	Field mustard	cytosol	93.41	93.41
Bra025058.1-P	Field mustard	cytosol	93.41	93.41
TraesCS1B01G144300.1	Wheat	cytosol	85.71	92.86
CDY64920	Canola	cytosol	92.86	92.35
TraesCS1A01G125100.1	Wheat	nucleus	91.21	92.22
CDX99436	Canola	cytosol, extracellular	92.86	91.85
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	90.66	91.67
GSMUA_Achr1P20570_001	Banana	cytosol	18.13	91.67
KRH62765	Soybean	cytosol	51.65	91.26
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	90.11	91.11
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	90.11	91.11
TraesCS3B01G154600.1	Wheat	cytosol	90.11	91.11
TraesCS3A01G136800.1	Wheat	cytosol	90.11	91.11
EES17871	Sorghum	cytosol	39.01	91.03
VIT_10s0003g01520.t01	Wine grape	cytosol	90.66	88.71
KXG20149	Sorghum	cytosol	92.31	87.5
Bra017591.1-P	Field mustard	cytosol	84.07	85.96
CDX98322	Canola	cytosol	68.13	85.52
KRH56320	Soybean	cytosol, nucleus	87.91	80.4
HORVU1Hr1G028820.1	Barley	mitochondrion	90.66	80.1
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	93.96	78.8
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	93.96	78.8
KRH16362	Soybean	mitochondrion	37.36	76.4
CDY26360	Canola	plastid	93.96	75.33
CDX87764	Canola	mitochondrion	93.41	74.56
EES00248	Sorghum	cytosol, plastid, vacuole	19.78	73.47
Solyc04g080150.1.1	Tomato	unclear	37.36	69.39
CDX71934	Canola	cytosol	93.96	67.06
CDY49245	Canola	cytosol	93.96	66.02
VIT_03s0017g00140.t01	Wine grape	cytosol	35.16	63.37
VIT_19s0014g02400.t01	Wine grape	cytosol	36.81	63.21
GSMUA_Achr1P20580_001	Banana	cytosol	15.93	59.18
VIT_17s0053g00180.t01	Wine grape	cytosol	29.67	44.63
KRH12095	Soybean	cytosol, plastid, vacuole	9.89	12.0

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	EntrezGene:8085572	EntrezGene:8085573	UniProt:C5XYX5	ProteinID:EES04817.1
ProteinID:EES04818.1	GO:GO:0000027	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0022625	GO:GO:0030529	InterPro:IPR022803
EnsemblPlants:KXG29884	ProteinID:KXG29884	ProteinID:KXG29884.1	PFAM:PF00281	PFAM:PF00673	PIRSF:PIRSF002161
ScanProsite:PS00358	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS
InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	EnsemblPlantsGene:SORBI_3004G104100	SUPFAM:SSF55282	unigene:Sbi.14257	unigene:Sbi.20570
UniParc:UPI0001A85223	RefSeq:XP_002451841.1	RefSeq:XP_002451842.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:9808826..9810907

Molecular Weight (calculated)

20833.4 Da

IEP (calculated)

10.484

GRAVY (calculated)

-0.457

Length

182 amino acids

Sequence
(BLAST)

001: MASEKKQSNP MREIKVQKLV LNISVGESGD RLTRAAKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERAGYRV ARRRRCKARV GIQHRVTKED SMKWFQVKYE GVILNKAQAN TV

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.