Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P15510_001 | Banana | cytosol | 83.33 | 50.85 |
| GSMUA_Achr9P28790_001 | Banana | cytosol | 88.89 | 24.06 |
| GSMUA_Achr11P... | Banana | cytosol | 91.67 | 19.19 |
| GSMUA_Achr6P05600_001 | Banana | cytosol | 88.89 | 18.6 |
| GSMUA_Achr6P14670_001 | Banana | cytosol | 88.89 | 18.6 |
| TraesCS1B01G144300.1 | Wheat | cytosol | 86.11 | 18.45 |
| Zm00001d010016_P002 | Maize | cytosol | 91.67 | 18.23 |
| EES04818 | Sorghum | cytosol | 91.67 | 18.13 |
| Zm00001d046317_P001 | Maize | plastid | 91.67 | 18.13 |
| Os05t0207300-01 | Rice | plasma membrane | 91.67 | 18.13 |
| Os02t0235600-01 | Rice | cytosol, golgi, nucleus, plasma membrane | 91.67 | 18.13 |
| Os01t0205500-01 | Rice | nucleus | 91.67 | 18.13 |
| KXG31594 | Sorghum | cytosol | 91.67 | 18.13 |
| KXG29884 | Sorghum | cytosol | 91.67 | 18.13 |
| EES04817 | Sorghum | cytosol | 91.67 | 18.13 |
| EES17871 | Sorghum | cytosol | 38.89 | 17.95 |
| Zm00001d053547_P003 | Maize | plastid | 91.67 | 17.65 |
| TraesCS1D01G128800.1 | Wheat | cytosol, golgi, unclear | 86.11 | 17.22 |
| TraesCS3D01G137600.1 | Wheat | cytosol, extracellular, golgi | 86.11 | 17.22 |
| TraesCS3B01G154600.1 | Wheat | cytosol | 86.11 | 17.22 |
| TraesCS3A01G136800.1 | Wheat | cytosol | 86.11 | 17.22 |
| HORVU3Hr1G026060.1 | Barley | cytosol, plasma membrane | 86.11 | 17.22 |
| TraesCS1A01G125100.1 | Wheat | nucleus | 86.11 | 17.22 |
| KXG20149 | Sorghum | cytosol | 91.67 | 17.19 |
| Os06t0550000-00 | Rice | plastid | 91.67 | 16.58 |
| HORVU1Hr1G028820.1 | Barley | mitochondrion | 86.11 | 15.05 |
| GSMUA_Achr6P21560_001 | Banana | plasma membrane | 88.89 | 14.22 |
| Zm00001d030198_P001 | Maize | cytosol | 41.67 | 10.87 |
| Zm00001d016011_P001 | Maize | cytosol | 19.44 | 8.97 |
| GSMUA_Achr7P09400_001 | Banana | endoplasmic reticulum, extracellular | 91.67 | 7.8 |
| Zm00001d004475_P001 | Maize | cytosol | 11.11 | 4.71 |
| Zm00001d040878_P001 | Maize | cytosol | 25.0 | 2.9 |
| GSMUA_Achr1P20580_001 | Banana | cytosol | 0.0 | 0.0 |
| GSMUA_Achr2P15520_001 | Banana | plastid | 0.0 | 0.0 |
| GSMUA_Achr9P28800_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.1440.10 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr1G20570_001 | EnsemblPlants:GSMUA_Achr1P20570_001 |
| EnsemblPlants:GSMUA_Achr1T20570_001 | InterPro:IPR022803 | UniProt:M0S1L5 | PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 | InterPro:Ribosomal_L5 |
| InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 | UniParc:UPI000295CAEF | : | : | : |
Description
60S ribosomal protein L11 [Source:GMGC_GENE;Acc:GSMUA_Achr1G20570_001]
Coordinates
chr1:-:15486743..15487685
Molecular Weight (calculated)
4062.0 Da
IEP (calculated)
5.595
GRAVY (calculated)
0.019
Length
36 amino acids
Sequence
(BLAST)
(BLAST)
1: MQLLESGLKH IDLGIKYNPS TGIYGMDFYV MLERAG
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.