Factsheet for GSMUA_Achr7P09400_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 6
vacuole 5
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P05600_001	Banana	cytosol	39.48	97.09
GSMUA_Achr11P...	Banana	cytosol	39.24	96.51
GSMUA_Achr6P14670_001	Banana	cytosol	39.01	95.93
GSMUA_Achr1P20570_001	Banana	cytosol	7.8	91.67
GSMUA_Achr2P15510_001	Banana	cytosol	12.29	88.14
GSMUA_Achr9P28800_001	Banana	cytosol	6.38	87.1
GSMUA_Achr6P21560_001	Banana	plasma membrane	42.32	79.56
GSMUA_Achr9P28790_001	Banana	cytosol	22.93	72.93
GSMUA_Achr1P20580_001	Banana	cytosol	6.86	59.18
GSMUA_Achr2P15520_001	Banana	plastid	15.84	49.63
Zm00001d009311_P001	Maize	nucleus	9.46	36.36

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	GO:GO:0003674
GO:GO:0003735	GO:GO:0003824	GO:GO:0004601	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0020037	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr7G09400_001	EnsemblPlants:GSMUA_Achr7P09400_001	EnsemblPlants:GSMUA_Achr7T09400_001
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	InterPro:IPR022803	UniProt:M0TG28	PFAM:PF00141
PFAM:PF00281	PFAM:PF00673	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00358	ScanProsite:PS00435
PFscan:PS50873	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS	InterPro:Ribosomal_L5
InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF48113	SUPFAM:SSF55282
UniParc:UPI000296B002	SEG:seg	:	:	:	:

Description

60S ribosomal protein L11 [Source:GMGC_GENE;Acc:GSMUA_Achr7G09400_001]

Coordinates

chr7:-:7690139..7695898

Molecular Weight (calculated)

46630.4 Da

IEP (calculated)

9.502

GRAVY (calculated)

-0.018

Length

423 amino acids

Sequence
(BLAST)

001: MVEVMLKPFI FCLKIFGSLL NTFPYHEHPF FFHNCFGCVA SVLMDDTATF FGEKTAIPNA NSLRGFDVVN DIKSEVEKVC PGTVSCADVL ALAARDGVVL
101: LGGPSWSVPL GRRDATTASK DASEIDLPAL DSSLAELISA LSAKGLSARD LTALSGAHTI GQTRFLNFRY HVYNDTNIDA GFATLRWASL VAFPSFRALA
201: YIKQKPLALP YLGFLVPVDL SAARAAATPT PPLHSADLPV AMASEKKLSN PMREIKVQKL VLNISVGESG DRLTRAAKVL EQLSGQTPVF SKARYTVRSF
301: GIRRNEKIAC YVTVRGDKAM QLLESGLKVK EYELLRRNFS DTGCFGFGIQ EHIDLGIKYD PSTGIYGMDF YVVLERAGYR VSRRRRCKSR VGIQHRVTKE
401: DSMKWFQVKY EGVILNKAQG TTS

Best Arabidopsis Sequence Match ( AT5G45775.2 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.