Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P20580_001 | Banana | cytosol | 80.65 | 51.02 |
| VIT_03s0017g00140.t01 | Wine grape | cytosol | 77.42 | 23.76 |
| VIT_19s0014g02400.t01 | Wine grape | cytosol | 77.42 | 22.64 |
| VIT_17s0053g00180.t01 | Wine grape | cytosol | 77.42 | 19.83 |
| CDX98322 | Canola | cytosol | 80.65 | 17.24 |
| GSMUA_Achr6P14670_001 | Banana | cytosol | 87.1 | 15.7 |
| GSMUA_Achr6P05600_001 | Banana | cytosol | 87.1 | 15.7 |
| GSMUA_Achr11P... | Banana | cytosol | 87.1 | 15.7 |
| CDY39447 | Canola | cytosol | 80.65 | 14.53 |
| CDY23103 | Canola | cytosol | 80.65 | 14.53 |
| CDY00582 | Canola | cytosol | 80.65 | 14.53 |
| CDY60533 | Canola | cytosol | 80.65 | 14.53 |
| CDX78887 | Canola | cytosol | 80.65 | 14.53 |
| CDX77611 | Canola | cytosol | 80.65 | 14.53 |
| CDY62552 | Canola | cytosol | 80.65 | 14.53 |
| PGSC0003DMT400067873 | Potato | cytosol | 83.87 | 14.36 |
| Solyc02g086240.2.1 | Tomato | cytosol | 83.87 | 14.36 |
| PGSC0003DMT400052643 | Potato | cytosol | 83.87 | 14.36 |
| PGSC0003DMT400027379 | Potato | cytosol | 83.87 | 14.36 |
| PGSC0003DMT400020315 | Potato | cytosol | 83.87 | 14.36 |
| Solyc07g055230.2.1 | Tomato | cytosol | 83.87 | 14.36 |
| Solyc10g007980.2.1 | Tomato | cytosol | 83.87 | 14.36 |
| Solyc12g010930.1.1 | Tomato | extracellular | 83.87 | 14.36 |
| GSMUA_Achr2P15520_001 | Banana | plastid | 61.29 | 14.07 |
| Bra017591.1-P | Field mustard | cytosol | 80.65 | 14.04 |
| Bra025058.1-P | Field mustard | cytosol | 80.65 | 13.74 |
| AT2G42740.1 | Thale cress | cytosol | 80.65 | 13.74 |
| Bra021990.1-P | Field mustard | cytosol | 80.65 | 13.74 |
| Bra013342.1-P | Field mustard | cytosol | 80.65 | 13.74 |
| Bra012580.1-P | Field mustard | cytosol | 80.65 | 13.74 |
| AT5G45775.2 | Thale cress | cytosol | 80.65 | 13.74 |
| AT4G18730.1 | Thale cress | cytosol | 80.65 | 13.74 |
| AT3G58700.1 | Thale cress | cytosol | 80.65 | 13.74 |
| CDY64920 | Canola | cytosol | 80.65 | 13.66 |
| CDX99436 | Canola | cytosol, extracellular | 80.65 | 13.59 |
| GSMUA_Achr6P21560_001 | Banana | plasma membrane | 87.1 | 12.0 |
| CDX88999 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 80.65 | 11.52 |
| Bra014558.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 80.65 | 11.52 |
| CDY26360 | Canola | plastid | 80.65 | 11.01 |
| CDX87764 | Canola | mitochondrion | 80.65 | 10.96 |
| Solyc04g080150.1.1 | Tomato | unclear | 32.26 | 10.2 |
| CDX71934 | Canola | cytosol | 80.65 | 9.8 |
| CDY49245 | Canola | cytosol | 80.65 | 9.65 |
| GSMUA_Achr7P09400_001 | Banana | endoplasmic reticulum, extracellular | 87.1 | 6.38 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 19.35 | 4.0 |
| GSMUA_Achr9P28790_001 | Banana | cytosol | 3.23 | 0.75 |
| GSMUA_Achr2P15510_001 | Banana | cytosol | 0.0 | 0.0 |
| GSMUA_Achr1P20570_001 | Banana | cytosol | 0.0 | 0.0 |
| Zm00001d000159_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.1440.10 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr9G28800_001 | EnsemblPlants:GSMUA_Achr9P28800_001 |
| EnsemblPlants:GSMUA_Achr9T28800_001 | InterPro:IPR022803 | UniProt:M0U4D7 | PFAM:PF00281 | PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 |
| InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_N | InterPro:Ribosomal_L5_dom_sf | UniParc:UPI00029491C7 | : | : |
Description
60S ribosomal protein L11 [Source:GMGC_GENE;Acc:GSMUA_Achr9G28800_001]
Coordinates
chr9:-:32668486..32669173
Molecular Weight (calculated)
3520.3 Da
IEP (calculated)
11.039
GRAVY (calculated)
-0.226
Length
31 amino acids
Sequence
(BLAST)
(BLAST)
1: MREIKVQKLV LNISVGESGD RLTRAAKFWS S
001: MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGIQE
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.