Factsheet for Zm00001d000159_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009311_P001	Maize	nucleus	95.83	41.82
VIT_03s0017g00140.t01	Wine grape	cytosol	8.33	3.96
VIT_19s0014g02400.t01	Wine grape	cytosol	8.33	3.77
VIT_17s0053g00180.t01	Wine grape	cytosol	8.33	3.31
KRH12095	Soybean	cytosol, plastid, vacuole	8.33	2.67
CDY62552	Canola	cytosol	8.33	2.33
CDY60533	Canola	cytosol	8.33	2.33
CDX77611	Canola	cytosol	8.33	2.33
CDX78887	Canola	cytosol	8.33	2.33
CDY39447	Canola	cytosol	8.33	2.33
CDY23103	Canola	cytosol	8.33	2.33
CDY00582	Canola	cytosol	8.33	2.33
Bra017591.1-P	Field mustard	cytosol	8.33	2.25
Zm00001d010016_P002	Maize	cytosol	8.33	2.21
AT3G58700.1	Thale cress	cytosol	8.33	2.2
Zm00001d046317_P001	Maize	plastid	8.33	2.2
Bra013342.1-P	Field mustard	cytosol	8.33	2.2
Bra012580.1-P	Field mustard	cytosol	8.33	2.2
Bra021990.1-P	Field mustard	cytosol	8.33	2.2
AT5G45775.2	Thale cress	cytosol	8.33	2.2
AT2G42740.1	Thale cress	cytosol	8.33	2.2
AT4G18730.1	Thale cress	cytosol	8.33	2.2
Bra025058.1-P	Field mustard	cytosol	8.33	2.2
CDY64920	Canola	cytosol	8.33	2.19
CDX99436	Canola	cytosol, extracellular	8.33	2.17
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	8.33	1.84
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	8.33	1.84
CDY26360	Canola	plastid	8.33	1.76
CDX87764	Canola	mitochondrion	8.33	1.75
PGSC0003DMT400020315	Potato	cytosol	6.25	1.66
PGSC0003DMT400027379	Potato	cytosol	6.25	1.66
PGSC0003DMT400052643	Potato	cytosol	6.25	1.66
PGSC0003DMT400067873	Potato	cytosol	6.25	1.66
Solyc02g086240.2.1	Tomato	cytosol	6.25	1.66
Solyc07g055230.2.1	Tomato	cytosol	6.25	1.66
Solyc10g007980.2.1	Tomato	cytosol	6.25	1.66
Solyc12g010930.1.1	Tomato	extracellular	6.25	1.66
Zm00001d053547_P003	Maize	plastid	6.25	1.6
CDX71934	Canola	cytosol	8.33	1.57
CDY49245	Canola	cytosol	8.33	1.54
Solyc04g080150.1.1	Tomato	unclear	2.08	1.02
Zm00001d004475_P001	Maize	cytosol	0.0	0.0
GSMUA_Achr9P28800_001	Banana	cytosol	0.0	0.0
Zm00001d016011_P001	Maize	cytosol	0.0	0.0
Zm00001d030198_P001	Maize	cytosol	0.0	0.0
Zm00001d040878_P001	Maize	cytosol	0.0	0.0
CDX98322	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d000159_P001	EnsemblPlants:Zm00001d000159_T001	EnsemblPlantsGene:Zm00001d000159	Gene3D:3.30.1440.10	InterPro:IPR022803	InterPro:Ribosomal_L5_N
InterPro:Ribosomal_L5_dom_sf	PFAM:PF00281	UniParc:UPI00084499D0	UniProt:A0A1X7YFP6	MapMan:35.2	:

Description

60S ribosomal protein L11-2

Coordinates

chrB73V4_ctg53:-:231774..233143

Molecular Weight (calculated)

5263.5 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.033

Length

48 amino acids

Sequence
(BLAST)

1: MQEMKVQKLV LNISVGESGD HLTRAAKEMV PVTLHGSVGH NEAIQICY

Best Arabidopsis Sequence Match ( AT5G45775.1 )
(BLAST)

001: MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGIQE
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.