Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016011_P001 | Maize | cytosol | 42.03 | 74.36 |
| GSMUA_Achr1P20580_001 | Banana | cytosol | 21.01 | 59.18 |
| Zm00001d010016_P002 | Maize | cytosol | 77.54 | 59.12 |
| Zm00001d046317_P001 | Maize | plastid | 77.54 | 58.79 |
| KXG31594 | Sorghum | cytosol | 76.81 | 58.24 |
| Os01t0205500-01 | Rice | nucleus | 76.09 | 57.69 |
| Zm00001d053547_P003 | Maize | plastid | 76.09 | 56.15 |
| Zm00001d004475_P001 | Maize | cytosol | 34.06 | 55.29 |
| GSMUA_Achr1P20570_001 | Banana | cytosol | 10.87 | 41.67 |
| Zm00001d009311_P001 | Maize | nucleus | 26.09 | 32.73 |
| Zm00001d040878_P001 | Maize | cytosol | 64.49 | 28.71 |
| Zm00001d000159_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.30.1440.10 | MapMan:35.1 | UniProt:A0A1D6KAW1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 |
| InterPro:IPR022803 | ProteinID:ONM00547.1 | PFAM:PF00281 | PFAM:PF00673 | PIRSF:PIRSF002161 | PANTHER:PTHR11994 |
| PANTHER:PTHR11994:SF15 | InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_C | InterPro:Ribosomal_L5_N | InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 |
| UniParc:UPI0008434349 | EnsemblPlantsGene:Zm00001d030198 | EnsemblPlants:Zm00001d030198_P001 | EnsemblPlants:Zm00001d030198_T001 | : | : |
Description
60S ribosomal protein L11-1
Coordinates
chr1:-:112883089..112885224
Molecular Weight (calculated)
15742.1 Da
IEP (calculated)
10.296
GRAVY (calculated)
-0.341
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MREMKVQKLV LNISVGESGD RLTRAAKVLE QLTSQSPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE NELPRRNFSD TGCFGFGIQE
101: HIDLGIKQSM FYLQQASRHQ AVRMEMFFGS FLNESVSP
101: HIDLGIKQSM FYLQQASRHQ AVRMEMFFGS FLNESVSP
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.