Factsheet for Zm00001d010016_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046317_P001	Maize	plastid	98.34	97.8
Zm00001d053547_P003	Maize	plastid	96.13	93.05
GSMUA_Achr1P20570_001	Banana	cytosol	18.23	91.67
EES17871	Sorghum	cytosol	39.23	91.03
Zm00001d016011_P001	Maize	cytosol	37.02	85.9
Zm00001d030198_P001	Maize	cytosol	59.12	77.54
GSMUA_Achr1P20580_001	Banana	cytosol	16.57	61.22
Zm00001d004475_P001	Maize	cytosol	27.62	58.82
Zm00001d009311_P001	Maize	nucleus	22.65	37.27
Zm00001d040878_P001	Maize	cytosol	55.25	32.26
Zm00001d000159_P001	Maize	cytosol	2.21	8.33

Protein Annotations

EntrezGene:100193878	MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	ProteinID:AQK93235.1	ProteinID:AQK93236.1	UniProt:B4FGL9
EMBL:BT036257	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	InterPro:IPR022803	PFAM:PF00281
PFAM:PF00673	PIRSF:PIRSF002161	ScanProsite:PS00358	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5
InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282	UniParc:UPI00017B6E46
EnsemblPlantsGene:Zm00001d010016	EnsemblPlants:Zm00001d010016_P002	EnsemblPlants:Zm00001d010016_T002	SEG:seg	:	:

Description

60S ribosomal protein L11-1

Coordinates

chr8:+:95242385..95245137

Molecular Weight (calculated)

20736.2 Da

IEP (calculated)

10.484

GRAVY (calculated)

-0.497

Length

181 amino acids

Sequence
(BLAST)

001: MASEKKQSNP MREIKVQKLV LNISVGESGD RLTRAAKVLE QLSGQSPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERAGYRV ARRRRCKSRV GIQHRVTKED AMKWFQVKYE GVILNKAQNT S

Best Arabidopsis Sequence Match ( AT5G45775.2 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.