CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0205500-01	Rice	nucleus	98.9	98.9
EES04817	Sorghum	cytosol	97.25	97.25
EES04818	Sorghum	cytosol	97.25	97.25
KXG29884	Sorghum	cytosol	97.25	97.25
Solyc12g010930.1.1	Tomato	extracellular	94.51	95.03
PGSC0003DMT400020315	Potato	cytosol	94.51	95.03
PGSC0003DMT400027379	Potato	cytosol	94.51	95.03
PGSC0003DMT400052643	Potato	cytosol	94.51	95.03
PGSC0003DMT400067873	Potato	cytosol	94.51	95.03
Solyc02g086240.2.1	Tomato	cytosol	94.51	95.03
Solyc07g055230.2.1	Tomato	cytosol	94.51	95.03
Solyc10g007980.2.1	Tomato	cytosol	94.51	95.03
EES17871	Sorghum	cytosol	40.66	94.87
KRH62493	Soybean	endoplasmic reticulum, nucleus	93.96	94.48
KRH56423	Soybean	cytosol	93.96	94.48
KRH55704	Soybean	cytosol	93.96	94.48
KRH55687	Soybean	nucleus	93.96	94.48
KRH25821	Soybean	cytosol	93.96	94.48
KRH13277	Soybean	cytosol	93.96	94.48
KRH25819	Soybean	nucleus	93.41	93.92
AT2G42740.1	Thale cress	cytosol	93.41	93.41
AT3G58700.1	Thale cress	cytosol	93.41	93.41
AT4G18730.1	Thale cress	cytosol	93.41	93.41
AT5G45775.2	Thale cress	cytosol	93.41	93.41
CDY23103	Canola	cytosol	87.91	93.02
CDX77611	Canola	cytosol	87.91	93.02
CDX78887	Canola	cytosol	87.91	93.02
CDY60533	Canola	cytosol	87.91	93.02
CDY00582	Canola	cytosol	87.91	93.02
CDY39447	Canola	cytosol	87.91	93.02
CDY62552	Canola	cytosol	87.91	93.02
Bra012580.1-P	Field mustard	cytosol	92.86	92.86
Bra013342.1-P	Field mustard	cytosol	92.86	92.86
Bra021990.1-P	Field mustard	cytosol	92.86	92.86
Bra025058.1-P	Field mustard	cytosol	92.86	92.86
VIT_12s0028g01800.t01	Wine grape	cytosol	87.91	92.49
CDY64920	Canola	cytosol	92.31	91.8
GSMUA_Achr1P20570_001	Banana	cytosol	18.13	91.67
CDX99436	Canola	cytosol, extracellular	92.31	91.3
KRH62765	Soybean	cytosol	51.1	90.29
KXG20149	Sorghum	cytosol	95.05	90.1
VIT_10s0003g01520.t01	Wine grape	cytosol	90.66	88.71
Zm00001d016011_P001	Maize	cytosol	36.81	85.9
Bra017591.1-P	Field mustard	cytosol	82.97	84.83
CDX98322	Canola	cytosol	67.03	84.14
KRH56320	Soybean	cytosol, nucleus	87.91	80.4
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	92.86	77.88
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	92.86	77.88
Zm00001d030198_P001	Maize	cytosol	58.24	76.81
EES00248	Sorghum	cytosol, plastid, vacuole	20.33	75.51
KRH16362	Soybean	mitochondrion	36.81	75.28
CDY26360	Canola	plastid	92.86	74.45
CDX87764	Canola	mitochondrion	92.31	73.68
Solyc04g080150.1.1	Tomato	unclear	37.36	69.39
CDX71934	Canola	cytosol	92.86	66.27
CDY49245	Canola	cytosol	92.86	65.25
VIT_03s0017g00140.t01	Wine grape	cytosol	35.71	64.36
VIT_19s0014g02400.t01	Wine grape	cytosol	37.36	64.15
GSMUA_Achr1P20580_001	Banana	cytosol	16.48	61.22
Zm00001d004475_P001	Maize	cytosol	27.47	58.82
VIT_17s0053g00180.t01	Wine grape	cytosol	29.67	44.63
Zm00001d040878_P001	Maize	cytosol	54.4	31.94
KRH12095	Soybean	cytosol, plastid, vacuole	9.89	12.0

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	EntrezGene:8084319	UniProt:A0A1B6Q0Z3	GO:GO:0003674	GO:GO:0003735
GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0030529	InterPro:IPR022803	EnsemblPlants:KXG31594	ProteinID:KXG31594	ProteinID:KXG31594.2	PFAM:PF00281
PFAM:PF00673	PIRSF:PIRSF002161	ScanProsite:PS00358	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5
InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	EnsemblPlantsGene:SORBI_3003G025200	SUPFAM:SSF55282
UniParc:UPI0001A843B2	RefSeq:XP_002454974.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:2126474..2128929

Molecular Weight (calculated)

20821.3 Da

IEP (calculated)

10.484

GRAVY (calculated)

-0.485

Length

182 amino acids

Sequence
(BLAST)

001: MASEKKQSNP MREIKVQKLV LNISVGESGD RLTRAAKVLE QLSGQSPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSE
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERAGYRV ARRRRCKSRV GIQHRVTKED AMKWFQVKYE GVILNKAQAN TS

Best Arabidopsis Sequence Match ( AT5G45775.2 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.