CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62552	Canola	cytosol	100.0	100.0
CDY39447	Canola	cytosol	100.0	100.0
CDY60533	Canola	cytosol	99.42	99.42
CDX77611	Canola	cytosol	99.42	99.42
CDY23103	Canola	cytosol	99.42	99.42
CDY00582	Canola	cytosol	99.42	99.42
Bra013342.1-P	Field mustard	cytosol	100.0	94.51
CDY64920	Canola	cytosol	100.0	93.99
AT4G18730.1	Thale cress	cytosol	99.42	93.96
CDX99436	Canola	cytosol, extracellular	100.0	93.48
KRH62765	Soybean	cytosol	54.65	91.26
TraesCS1B01G144300.1	Wheat	cytosol	88.37	90.48
CDX98322	Canola	cytosol	76.16	90.34
KRH62493	Soybean	endoplasmic reticulum, nucleus	94.77	90.06
KRH56423	Soybean	cytosol	94.77	90.06
KRH55704	Soybean	cytosol	94.77	90.06
KRH25821	Soybean	cytosol	94.77	90.06
KRH13277	Soybean	cytosol	94.77	90.06
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	94.77	89.56
Solyc12g010930.1.1	Tomato	extracellular	94.19	89.5
Solyc10g007980.2.1	Tomato	cytosol	94.19	89.5
Solyc07g055230.2.1	Tomato	cytosol	94.19	89.5
Solyc02g086240.2.1	Tomato	cytosol	94.19	89.5
PGSC0003DMT400067873	Potato	cytosol	94.19	89.5
PGSC0003DMT400052643	Potato	cytosol	94.19	89.5
PGSC0003DMT400027379	Potato	cytosol	94.19	89.5
PGSC0003DMT400020315	Potato	cytosol	94.19	89.5
KRH55687	Soybean	nucleus	94.19	89.5
KRH25819	Soybean	nucleus	94.19	89.5
KXG29884	Sorghum	cytosol	93.6	88.46
EES04818	Sorghum	cytosol	93.6	88.46
Os01t0205500-01	Rice	nucleus	93.6	88.46
Os05t0207300-01	Rice	plasma membrane	93.6	88.46
EES04817	Sorghum	cytosol	93.6	88.46
EES17871	Sorghum	cytosol	40.12	88.46
KXG31594	Sorghum	cytosol	93.02	87.91
VIT_10s0003g01520.t01	Wine grape	cytosol	94.19	87.1
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	90.7	86.67
TraesCS3A01G136800.1	Wheat	cytosol	90.7	86.67
TraesCS3B01G154600.1	Wheat	cytosol	90.7	86.67
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	90.7	86.67
TraesCS1A01G125100.1	Wheat	nucleus	89.53	85.56
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	89.53	85.56
HORVU0Hr1G003140.1	Barley	mitochondrion	35.47	83.56
HORVU1Hr1G032650.1	Barley	mitochondrion	43.02	81.32
Os06t0550000-00	Rice	plastid	93.6	80.9
GSMUA_Achr9P28800_001	Banana	cytosol	14.53	80.65
HORVU7Hr1G044560.1	Barley	mitochondrion	43.6	78.95
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	99.42	78.8
KXG20149	Sorghum	cytosol	87.79	78.65
KRH16362	Soybean	mitochondrion	40.12	77.53
KRH56320	Soybean	cytosol, nucleus	88.95	76.88
CDY26360	Canola	plastid	99.42	75.33
HORVU1Hr1G028820.1	Barley	mitochondrion	89.53	74.76
CDX87764	Canola	mitochondrion	98.84	74.56
EES00248	Sorghum	cytosol, plastid, vacuole	20.93	73.47
Solyc04g080150.1.1	Tomato	unclear	40.12	70.41
CDX71934	Canola	cytosol	99.42	67.06
CDY49245	Canola	cytosol	99.42	66.02
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	34.3	61.46
KRH12095	Soybean	cytosol, plastid, vacuole	9.3	10.67
Zm00001d000159_P001	Maize	cytosol	2.33	8.33

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	GO:A0A078HNK7	UniProt:A0A078HNK7	EnsemblPlants:CDX78887	ProteinID:CDX78887
ProteinID:CDX78887.1	ProteinID:CDY39447.1	ProteinID:CDY62552.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529
EnsemblPlantsGene:GSBRNA2T00131366001	InterPro:IPR022803	PFAM:PF00281	PFAM:PF00673	PIRSF:PIRSF002161	ScanProsite:PS00358
PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N
InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282	UniParc:UPI0004EDF982	SEG:seg	:	:

Description

BnaA01g09540DBnaA03g58370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNK7]

Coordinates

chrLK031816:+:638020..639179

Molecular Weight (calculated)

19762.1 Da

IEP (calculated)

10.453

GRAVY (calculated)

-0.440

Length

172 amino acids

Sequence
(BLAST)

001: MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGDKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGIQE
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Best Arabidopsis Sequence Match ( AT5G45775.1 )
(BLAST)

001: MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGIQE
101: HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.