Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0207300-01 | Rice | plasma membrane | 90.95 | 99.45 |
| Os01t0205500-01 | Rice | nucleus | 90.45 | 98.9 |
| Os02t0235600-01 | Rice | cytosol, golgi, nucleus, plasma membrane | 89.95 | 98.35 |
| Zm00001d046317_P001 | Maize | plastid | 89.45 | 97.8 |
| Solyc07g055230.2.1 | Tomato | cytosol | 85.43 | 93.92 |
| Solyc02g086240.2.1 | Tomato | cytosol | 85.43 | 93.92 |
| PGSC0003DMT400067873 | Potato | cytosol | 85.43 | 93.92 |
| PGSC0003DMT400052643 | Potato | cytosol | 85.43 | 93.92 |
| PGSC0003DMT400027379 | Potato | cytosol | 85.43 | 93.92 |
| PGSC0003DMT400020315 | Potato | cytosol | 85.43 | 93.92 |
| Solyc10g007980.2.1 | Tomato | cytosol | 85.43 | 93.92 |
| Solyc12g010930.1.1 | Tomato | extracellular | 85.43 | 93.92 |
| CDX77611 | Canola | cytosol | 80.9 | 93.6 |
| CDX78887 | Canola | cytosol | 80.9 | 93.6 |
| CDY62552 | Canola | cytosol | 80.9 | 93.6 |
| CDY60533 | Canola | cytosol | 80.9 | 93.6 |
| CDY00582 | Canola | cytosol | 80.9 | 93.6 |
| CDY23103 | Canola | cytosol | 80.9 | 93.6 |
| CDY39447 | Canola | cytosol | 80.9 | 93.6 |
| AT3G58700.1 | Thale cress | cytosol | 85.43 | 93.41 |
| AT2G42740.1 | Thale cress | cytosol | 85.43 | 93.41 |
| AT4G18730.1 | Thale cress | cytosol | 85.43 | 93.41 |
| AT5G45775.2 | Thale cress | cytosol | 85.43 | 93.41 |
| KRH62493 | Soybean | endoplasmic reticulum, nucleus | 84.92 | 93.37 |
| KRH56423 | Soybean | cytosol | 84.92 | 93.37 |
| KRH13277 | Soybean | cytosol | 84.92 | 93.37 |
| KRH55704 | Soybean | cytosol | 84.92 | 93.37 |
| KRH25821 | Soybean | cytosol | 84.92 | 93.37 |
| KRH55687 | Soybean | nucleus | 84.92 | 93.37 |
| CDY64920 | Canola | cytosol | 85.43 | 92.9 |
| Bra025058.1-P | Field mustard | cytosol | 84.92 | 92.86 |
| Bra021990.1-P | Field mustard | cytosol | 84.92 | 92.86 |
| Bra013342.1-P | Field mustard | cytosol | 84.92 | 92.86 |
| Bra012580.1-P | Field mustard | cytosol | 84.92 | 92.86 |
| KRH25819 | Soybean | nucleus | 84.42 | 92.82 |
| CDX99436 | Canola | cytosol, extracellular | 85.43 | 92.39 |
| VIT_12s0028g01800.t01 | Wine grape | cytosol | 79.9 | 91.91 |
| GSMUA_Achr1P20570_001 | Banana | cytosol | 16.58 | 91.67 |
| KRH62765 | Soybean | cytosol | 46.73 | 90.29 |
| KXG20149 | Sorghum | cytosol | 85.93 | 89.06 |
| VIT_10s0003g01520.t01 | Wine grape | cytosol | 82.91 | 88.71 |
| Bra017591.1-P | Field mustard | cytosol | 76.38 | 85.39 |
| CDX98322 | Canola | cytosol | 61.81 | 84.83 |
| KRH56320 | Soybean | cytosol, nucleus | 80.4 | 80.4 |
| CDX88999 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 85.43 | 78.34 |
| Bra014558.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 85.43 | 78.34 |
| KRH16362 | Soybean | mitochondrion | 33.67 | 75.28 |
| CDY26360 | Canola | plastid | 85.43 | 74.89 |
| CDX87764 | Canola | mitochondrion | 84.92 | 74.12 |
| Solyc04g080150.1.1 | Tomato | unclear | 34.17 | 69.39 |
| CDX71934 | Canola | cytosol | 85.43 | 66.67 |
| CDY49245 | Canola | cytosol | 85.43 | 65.64 |
| VIT_03s0017g00140.t01 | Wine grape | cytosol | 31.66 | 62.38 |
| VIT_19s0014g02400.t01 | Wine grape | cytosol | 33.17 | 62.26 |
| GSMUA_Achr1P20580_001 | Banana | cytosol | 14.57 | 59.18 |
| VIT_17s0053g00180.t01 | Wine grape | cytosol | 26.13 | 42.98 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 8.54 | 11.33 |
Protein Annotations
| MapMan:17.1.2.1.11 | Gene3D:3.30.1440.10 | UniProt:A0A0P0WXQ4 | ProteinID:BAS98182.1 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR022803 | EnsemblPlantsGene:Os06g0550000 | EnsemblPlants:Os06t0550000-00 | PFAM:PF00281 | PFAM:PF00673 | PIRSF:PIRSF002161 |
| ScanProsite:PS00358 | PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 | InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_C | InterPro:Ribosomal_L5_CS |
| InterPro:Ribosomal_L5_N | InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 | UniParc:UPI000393BD27 | SEG:seg | : |
Description
Similar to 60S ribosomal protein L11. (Os06t0550000-00)
Coordinates
chr6:-:20851191..20853613
Molecular Weight (calculated)
22458.3 Da
IEP (calculated)
10.321
GRAVY (calculated)
-0.426
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: GLPSAARCGC PHACVLSQAS EKKQSNPMRE IKVQKLVLNI SVGESGDRLT RASKVLEQLS GQSPVFSKAR YTVRSFGIRR NEKIACYVTV RGEKAMQLLE
101: SGLKVKEYEL LRRNFSETGC FGFGIQEHID LGIKYDPSTG IYGMDFYVVL ERAGYRVARR RRCKSRVGIQ HRVTKEDAMK WFQVKYEGVI LNKAQANTS
101: SGLKVKEYEL LRRNFSETGC FGFGIQEHID LGIKYDPSTG IYGMDFYVVL ERAGYRVARR RRCKSRVGIQ HRVTKEDAMK WFQVKYEGVI LNKAQANTS
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.