Factsheet for Bra017591.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23103	Canola	cytosol	91.57	94.77
CDY60533	Canola	cytosol	91.57	94.77
Bra021990.1-P	Field mustard	cytosol	91.57	89.56
Bra012580.1-P	Field mustard	cytosol	91.01	89.01
Bra013342.1-P	Field mustard	cytosol	91.01	89.01
Bra025058.1-P	Field mustard	cytosol	91.01	89.01
AT5G45775.2	Thale cress	cytosol	90.45	88.46
TraesCS1B01G144300.1	Wheat	cytosol	81.46	86.31
KRH56423	Soybean	cytosol	86.52	85.08
KRH62493	Soybean	endoplasmic reticulum, nucleus	86.52	85.08
KRH55704	Soybean	cytosol	86.52	85.08
KRH25821	Soybean	cytosol	86.52	85.08
KRH13277	Soybean	cytosol	86.52	85.08
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	86.52	84.62
Solyc02g086240.2.1	Tomato	cytosol	85.96	84.53
PGSC0003DMT400067873	Potato	cytosol	85.96	84.53
Solyc12g010930.1.1	Tomato	extracellular	85.96	84.53
PGSC0003DMT400052643	Potato	cytosol	85.96	84.53
PGSC0003DMT400027379	Potato	cytosol	85.96	84.53
PGSC0003DMT400020315	Potato	cytosol	85.96	84.53
KRH25819	Soybean	nucleus	85.96	84.53
Solyc07g055230.2.1	Tomato	cytosol	85.96	84.53
KRH55687	Soybean	nucleus	85.96	84.53
Solyc10g007980.2.1	Tomato	cytosol	85.96	84.53
KXG29884	Sorghum	cytosol	85.96	84.07
EES04818	Sorghum	cytosol	85.96	84.07
EES04817	Sorghum	cytosol	85.96	84.07
HORVU0Hr1G003140.1	Barley	mitochondrion	34.27	83.56
Os01t0205500-01	Rice	nucleus	85.39	83.52
Os05t0207300-01	Rice	plasma membrane	85.39	83.52
KRH62765	Soybean	cytosol	48.31	83.5
KXG31594	Sorghum	cytosol	84.83	82.97
VIT_10s0003g01520.t01	Wine grape	cytosol	86.52	82.8
TraesCS3A01G136800.1	Wheat	cytosol	83.71	82.78
TraesCS3B01G154600.1	Wheat	cytosol	83.71	82.78
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	83.71	82.78
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	83.71	82.78
TraesCS1A01G125100.1	Wheat	nucleus	82.58	81.67
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	82.58	81.67
GSMUA_Achr9P28800_001	Banana	cytosol	14.04	80.65
EES17871	Sorghum	cytosol	34.27	78.21
Os06t0550000-00	Rice	plastid	85.39	76.38
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	91.57	75.12
KXG20149	Sorghum	cytosol	79.78	73.96
HORVU1Hr1G032650.1	Barley	mitochondrion	37.64	73.63
KRH56320	Soybean	cytosol, nucleus	80.9	72.36
HORVU7Hr1G044560.1	Barley	mitochondrion	38.2	71.58
HORVU1Hr1G028820.1	Barley	mitochondrion	82.58	71.36
KRH16362	Soybean	mitochondrion	34.83	69.66
Solyc04g080150.1.1	Tomato	unclear	38.2	69.39
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	33.15	61.46
EES00248	Sorghum	cytosol, plastid, vacuole	15.73	57.14
KRH12095	Soybean	cytosol, plastid, vacuole	9.55	11.33
Zm00001d000159_P001	Maize	cytosol	2.25	8.33

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	EnsemblPlantsGene:Bra017591	EnsemblPlants:Bra017591.1	EnsemblPlants:Bra017591.1-P	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	GO:GO:0030529	InterPro:IPR022803	UniProt:M4DM59	PFAM:PF00281	PFAM:PF00673
PIRSF:PIRSF002161	ScanProsite:PS00358	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C
InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282	UniParc:UPI000254254B	SEG:seg

Description

AT5G45775 (E=6e-079) | 60S ribosomal protein L11 (RPL11D)

Coordinates

chrA09:+:16751683..16752670

Molecular Weight (calculated)

20469.8 Da

IEP (calculated)

10.138

GRAVY (calculated)

-0.361

Length

178 amino acids

Sequence
(BLAST)

001: MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGDKAMQ LLESGLKVKE YELLRRNFSD TGCFGFGLDL
101: IIYDDFTGFG LDWYDPSTGI YGMDFYVVLE RPGYRVARRR RCKARVGIQH RVTKDDAMKW FQVKYEGVIL NKSQNITG

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.