Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G003140.1 | Barley | mitochondrion | 63.54 | 83.56 |
| HORVU1Hr1G032650.1 | Barley | mitochondrion | 64.58 | 68.13 |
| HORVU7Hr1G044560.1 | Barley | mitochondrion | 65.62 | 66.32 |
| Solyc04g080150.1.1 | Tomato | unclear | 44.79 | 43.88 |
| KRH16362 | Soybean | mitochondrion | 40.62 | 43.82 |
| CDX98322 | Canola | cytosol | 57.29 | 37.93 |
| HORVU3Hr1G026060.1 | Barley | cytosol, plasma membrane | 64.58 | 34.44 |
| CDX78887 | Canola | cytosol | 61.46 | 34.3 |
| CDY62552 | Canola | cytosol | 61.46 | 34.3 |
| CDY60533 | Canola | cytosol | 61.46 | 34.3 |
| CDY39447 | Canola | cytosol | 61.46 | 34.3 |
| CDY23103 | Canola | cytosol | 61.46 | 34.3 |
| CDY00582 | Canola | cytosol | 61.46 | 34.3 |
| CDX77611 | Canola | cytosol | 61.46 | 34.3 |
| VIT_12s0028g01800.t01 | Wine grape | cytosol | 61.46 | 34.1 |
| PGSC0003DMT400020315 | Potato | cytosol | 62.5 | 33.15 |
| PGSC0003DMT400027379 | Potato | cytosol | 62.5 | 33.15 |
| PGSC0003DMT400052643 | Potato | cytosol | 62.5 | 33.15 |
| PGSC0003DMT400067873 | Potato | cytosol | 62.5 | 33.15 |
| Solyc02g086240.2.1 | Tomato | cytosol | 62.5 | 33.15 |
| Solyc07g055230.2.1 | Tomato | cytosol | 62.5 | 33.15 |
| Solyc10g007980.2.1 | Tomato | cytosol | 62.5 | 33.15 |
| Solyc12g010930.1.1 | Tomato | extracellular | 62.5 | 33.15 |
| Bra017591.1-P | Field mustard | cytosol | 61.46 | 33.15 |
| AT3G58700.1 | Thale cress | cytosol | 62.5 | 32.97 |
| AT2G42740.1 | Thale cress | cytosol | 62.5 | 32.97 |
| AT4G18730.1 | Thale cress | cytosol | 62.5 | 32.97 |
| AT5G45775.2 | Thale cress | cytosol | 62.5 | 32.97 |
| Bra012580.1-P | Field mustard | cytosol | 61.46 | 32.42 |
| Bra013342.1-P | Field mustard | cytosol | 61.46 | 32.42 |
| Bra021990.1-P | Field mustard | cytosol | 61.46 | 32.42 |
| Bra025058.1-P | Field mustard | cytosol | 61.46 | 32.42 |
| CDY64920 | Canola | cytosol | 61.46 | 32.24 |
| CDX99436 | Canola | cytosol, extracellular | 61.46 | 32.07 |
| KRH62493 | Soybean | endoplasmic reticulum, nucleus | 60.42 | 32.04 |
| KRH56423 | Soybean | cytosol | 60.42 | 32.04 |
| KRH55704 | Soybean | cytosol | 60.42 | 32.04 |
| KRH25821 | Soybean | cytosol | 60.42 | 32.04 |
| KRH55687 | Soybean | nucleus | 60.42 | 32.04 |
| KRH25819 | Soybean | nucleus | 60.42 | 32.04 |
| KRH13277 | Soybean | cytosol | 60.42 | 32.04 |
| VIT_10s0003g01520.t01 | Wine grape | cytosol | 61.46 | 31.72 |
| EES00248 | Sorghum | cytosol, plastid, vacuole | 15.62 | 30.61 |
| HORVU1Hr1G028820.1 | Barley | mitochondrion | 63.54 | 29.61 |
| KRH56320 | Soybean | cytosol, nucleus | 60.42 | 29.15 |
| VIT_19s0014g02400.t01 | Wine grape | cytosol | 31.25 | 28.3 |
| Bra014558.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 61.46 | 27.19 |
| CDX88999 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 61.46 | 27.19 |
| VIT_03s0017g00140.t01 | Wine grape | cytosol | 28.12 | 26.73 |
| CDY26360 | Canola | plastid | 61.46 | 25.99 |
| CDX87764 | Canola | mitochondrion | 61.46 | 25.88 |
| CDX71934 | Canola | cytosol | 61.46 | 23.14 |
| CDY49245 | Canola | cytosol | 61.46 | 22.78 |
| KRH62765 | Soybean | cytosol | 20.83 | 19.42 |
| VIT_17s0053g00180.t01 | Wine grape | cytosol | 18.75 | 14.88 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 6.25 | 4.0 |
Protein Annotations
| Gene3D:3.30.1440.10 | MapMan:35.1 | UniProt:A0A287WPL3 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU7Hr1G062960 |
| EnsemblPlants:HORVU7Hr1G062960.1 | InterPro:IPR022803 | PFAM:PF00281 | ScanProsite:PS00358 | PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 |
| InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_CS | InterPro:Ribosomal_L5_N | InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 | UniParc:UPI000B46EFA0 |
Description
No Description!
Coordinates
chrchr7H:-:306106819..306107610
Molecular Weight (calculated)
10797.2 Da
IEP (calculated)
10.277
GRAVY (calculated)
-0.221
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: NRFCSISLVL EQLSGQSPVF SKARYTVRSF GIRRNEKIAC YVTIRGEKTM QLLESGLKVK EYELLGGTSA TPDALASASR STLISACRRK WKEYLM
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.