Factsheet for HORVU1Hr1G028820.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	87.38	100.0
TraesCS1A01G125100.1	Wheat	nucleus	86.89	99.44
TraesCS1B01G144300.1	Wheat	cytosol	81.07	99.4
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	85.44	97.78
EES04818	Sorghum	cytosol	80.1	90.66
EES04817	Sorghum	cytosol	80.1	90.66
KXG29884	Sorghum	cytosol	80.1	90.66
KRH56423	Soybean	cytosol	79.61	90.61
KRH55704	Soybean	cytosol	79.61	90.61
KRH55687	Soybean	nucleus	79.61	90.61
KRH62493	Soybean	endoplasmic reticulum, nucleus	79.61	90.61
KRH13277	Soybean	cytosol	79.61	90.61
KRH25821	Soybean	cytosol	79.61	90.61
KRH62765	Soybean	cytosol	45.15	90.29
CDY23103	Canola	cytosol	75.24	90.12
CDY60533	Canola	cytosol	75.24	90.12
CDY00582	Canola	cytosol	75.24	90.12
CDX77611	Canola	cytosol	75.24	90.12
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	79.61	90.11
Os05t0207300-01	Rice	plasma membrane	79.61	90.11
KRH25819	Soybean	nucleus	79.13	90.06
VIT_12s0028g01800.t01	Wine grape	cytosol	75.24	89.6
CDX78887	Canola	cytosol	74.76	89.53
CDY39447	Canola	cytosol	74.76	89.53
CDY62552	Canola	cytosol	74.76	89.53
PGSC0003DMT400020315	Potato	cytosol	78.16	88.95
Solyc02g086240.2.1	Tomato	cytosol	78.16	88.95
PGSC0003DMT400027379	Potato	cytosol	78.16	88.95
PGSC0003DMT400052643	Potato	cytosol	78.16	88.95
PGSC0003DMT400067873	Potato	cytosol	78.16	88.95
Solyc07g055230.2.1	Tomato	cytosol	78.16	88.95
Solyc10g007980.2.1	Tomato	cytosol	78.16	88.95
Solyc12g010930.1.1	Tomato	extracellular	78.16	88.95
AT2G42740.1	Thale cress	cytosol	78.16	88.46
Bra021990.1-P	Field mustard	cytosol	77.67	87.91
AT5G45775.2	Thale cress	cytosol	77.67	87.91
AT4G18730.1	Thale cress	cytosol	77.67	87.91
AT3G58700.1	Thale cress	cytosol	77.67	87.91
Bra025058.1-P	Field mustard	cytosol	77.18	87.36
Bra013342.1-P	Field mustard	cytosol	77.18	87.36
Bra012580.1-P	Field mustard	cytosol	77.18	87.36
Zm00001d053547_P003	Maize	plastid	79.13	87.17
CDY64920	Canola	cytosol	76.7	86.34
HORVU0Hr1G003140.1	Barley	mitochondrion	30.58	86.3
GSMUA_Achr1P20570_001	Banana	cytosol	15.05	86.11
CDX99436	Canola	cytosol, extracellular	76.7	85.87
VIT_10s0003g01520.t01	Wine grape	cytosol	77.18	85.48
HORVU1Hr1G032650.1	Barley	mitochondrion	37.38	84.62
Bra017591.1-P	Field mustard	cytosol	71.36	82.58
CDX98322	Canola	cytosol	57.77	82.07
HORVU7Hr1G044560.1	Barley	mitochondrion	37.38	81.05
KRH56320	Soybean	cytosol, nucleus	74.27	76.88
KRH16362	Soybean	mitochondrion	33.01	76.4
Bra014558.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	78.64	74.65
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	78.64	74.65
CDY26360	Canola	plastid	80.1	72.69
CDX87764	Canola	mitochondrion	79.61	71.93
Solyc04g080150.1.1	Tomato	unclear	32.52	68.37
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	29.61	63.54
CDX71934	Canola	cytosol	78.16	63.14
CDY49245	Canola	cytosol	78.16	62.16
GSMUA_Achr1P20580_001	Banana	cytosol	14.56	61.22
VIT_19s0014g02400.t01	Wine grape	cytosol	30.58	59.43
VIT_03s0017g00140.t01	Wine grape	cytosol	29.13	59.41
VIT_17s0053g00180.t01	Wine grape	cytosol	24.27	41.32
KRH12095	Soybean	cytosol, plastid, vacuole	9.71	13.33

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	UniProt:A0A287F0S2	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529
EnsemblPlantsGene:HORVU1Hr1G028820	EnsemblPlants:HORVU1Hr1G028820.1	InterPro:IPR022803	PFAM:PF00281	PFAM:PF00673	PIRSF:PIRSF002161
ScanProsite:PS00358	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15	InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS
InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282	UniParc:UPI000B46A45E	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:-:158586780..158588899

Molecular Weight (calculated)

23562.7 Da

IEP (calculated)

10.782

GRAVY (calculated)

-0.469

Length

206 amino acids

Sequence
(BLAST)

001: RRSHTQNQNP PIVRFLSTGG LPGQIIMSTE KKQLNTMREI KVQKLVLNIS VGESGDRLTR AAKVLEQLSG QSPVFSKARY TVRSFGIRRN EKIACYVTIR
101: GEKAMQLLES GLKVKEYELL RRNFSDTGCF GFGIQEHIDL GMKYDPSTGI YGMDFFVVLE RAGYRVSRRR RCKARVGIHQ RVTKEDAMKW FQVKYEGVIL
201: NKSHAS

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.