CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 4
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021990.1-P	Field mustard	cytosol	80.18	100.0
CDX77611	Canola	cytosol	75.77	100.0
CDY00582	Canola	cytosol	75.77	100.0
CDY23103	Canola	cytosol	75.77	100.0
CDY60533	Canola	cytosol	75.77	100.0
CDX78887	Canola	cytosol	75.33	99.42
CDY39447	Canola	cytosol	75.33	99.42
CDY62552	Canola	cytosol	75.33	99.42
AT5G45775.2	Thale cress	cytosol	79.3	98.9
CDY64920	Canola	cytosol	79.3	98.36
CDX99436	Canola	cytosol, extracellular	79.3	97.83
KRH25821	Soybean	cytosol	76.21	95.58
KRH62493	Soybean	endoplasmic reticulum, nucleus	76.21	95.58
KRH56423	Soybean	cytosol	76.21	95.58
KRH55704	Soybean	cytosol	76.21	95.58
KRH13277	Soybean	cytosol	76.21	95.58
Solyc12g010930.1.1	Tomato	extracellular	75.77	95.03
Solyc10g007980.2.1	Tomato	cytosol	75.77	95.03
Solyc07g055230.2.1	Tomato	cytosol	75.77	95.03
Solyc02g086240.2.1	Tomato	cytosol	75.77	95.03
PGSC0003DMT400067873	Potato	cytosol	75.77	95.03
PGSC0003DMT400052643	Potato	cytosol	75.77	95.03
PGSC0003DMT400027379	Potato	cytosol	75.77	95.03
PGSC0003DMT400020315	Potato	cytosol	75.77	95.03
KRH55687	Soybean	nucleus	75.77	95.03
KRH25819	Soybean	nucleus	75.77	95.03
Os02t0235600-01	Rice	cytosol, golgi, nucleus, plasma membrane	75.77	94.51
EES04817	Sorghum	cytosol	75.33	93.96
KXG29884	Sorghum	cytosol	75.33	93.96
EES04818	Sorghum	cytosol	75.33	93.96
Os05t0207300-01	Rice	plasma membrane	74.89	93.41
Os01t0205500-01	Rice	nucleus	74.45	92.86
KXG31594	Sorghum	cytosol	74.45	92.86
CDX87764	Canola	mitochondrion	92.95	92.54
KRH62765	Soybean	cytosol	41.85	92.23
VIT_10s0003g01520.t01	Wine grape	cytosol	74.89	91.4
TraesCS1B01G144300.1	Wheat	cytosol	67.4	91.07
TraesCS3A01G136800.1	Wheat	cytosol	71.81	90.56
TraesCS3B01G154600.1	Wheat	cytosol	71.81	90.56
HORVU3Hr1G026060.1	Barley	cytosol, plasma membrane	71.81	90.56
TraesCS3D01G137600.1	Wheat	cytosol, extracellular, golgi	71.81	90.56
CDX98322	Canola	cytosol	57.71	90.34
TraesCS1A01G125100.1	Wheat	nucleus	70.93	89.44
TraesCS1D01G128800.1	Wheat	cytosol, golgi, unclear	70.48	88.89
EES17871	Sorghum	cytosol	30.4	88.46
Os06t0550000-00	Rice	plastid	74.89	85.43
CDX88999	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	80.62	84.33
HORVU0Hr1G003140.1	Barley	mitochondrion	26.87	83.56
KXG20149	Sorghum	cytosol	70.48	83.33
KRH56320	Soybean	cytosol, nucleus	71.81	81.91
HORVU1Hr1G032650.1	Barley	mitochondrion	32.6	81.32
GSMUA_Achr9P28800_001	Banana	cytosol	11.01	80.65
HORVU1Hr1G028820.1	Barley	mitochondrion	72.69	80.1
HORVU7Hr1G044560.1	Barley	mitochondrion	33.04	78.95
KRH16362	Soybean	mitochondrion	30.4	77.53
CDX71934	Canola	cytosol	82.82	73.73
EES00248	Sorghum	cytosol, plastid, vacuole	15.86	73.47
CDY49245	Canola	cytosol	82.82	72.59
Solyc04g080150.1.1	Tomato	unclear	30.4	70.41
HORVU7Hr1G062960.1	Barley	cytosol, mitochondrion, plastid	25.99	61.46
KRH12095	Soybean	cytosol, plastid, vacuole	7.05	10.67
Zm00001d000159_P001	Maize	cytosol	1.76	8.33

Protein Annotations

MapMan:17.1.2.1.11	Gene3D:3.30.1440.10	GO:A0A078GIP4	UniProt:A0A078GIP4	EnsemblPlants:CDY26360	ProteinID:CDY26360
ProteinID:CDY26360.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	EnsemblPlantsGene:GSBRNA2T00035116001	InterPro:IPR022803
PFAM:PF00281	PFAM:PF00673	PIRSF:PIRSF002161	ScanProsite:PS00358	PANTHER:PTHR11994	PANTHER:PTHR11994:SF15
InterPro:Ribosomal_L5	InterPro:Ribosomal_L5_C	InterPro:Ribosomal_L5_CS	InterPro:Ribosomal_L5_N	InterPro:Ribosomal_L5_dom_sf	SUPFAM:SSF55282
UniParc:UPI0004EF3198	SEG:seg	:	:	:	:

Description

BnaA02g24100DBnaA02g24100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIP4]

Coordinates

chrLK032189:+:22965..29901

Molecular Weight (calculated)

25947.7 Da

IEP (calculated)

10.535

GRAVY (calculated)

-0.317

Length

227 amino acids

Sequence
(BLAST)

001: MSRLAIKLCH NFPSPITHFS SHSTQLRFRN SLCFLSLSSI VDLLQMASEK KLSNPMRDIK VQKLVLNISV GESGDRLTRA SKVLEQLSGQ TPVFSKARYT
101: VRSFGIRRNE KIACYVTVRG DKAMQLLESG LKVKEYELLR RNFSDTGCFG FGIQEHIDLG IKYDPSTGIY GMDFYVVLER PGYRVARRRR CKARVGIQHR
201: VTKDDAMKWF QVKYEGVILN KSQNITG

Best Arabidopsis Sequence Match ( AT2G42740.1 )
(BLAST)

001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKARV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG

Arabidopsis Description

RPL11A60S ribosomal protein L11-1 [Source:UniProtKB/Swiss-Prot;Acc:P42795]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.