Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78887 | Canola | cytosol | 93.99 | 100.0 |
| CDY62552 | Canola | cytosol | 93.99 | 100.0 |
| CDY39447 | Canola | cytosol | 93.99 | 100.0 |
| CDX99436 | Canola | cytosol, extracellular | 100.0 | 99.46 |
| CDX77611 | Canola | cytosol | 93.44 | 99.42 |
| CDY00582 | Canola | cytosol | 93.44 | 99.42 |
| CDY23103 | Canola | cytosol | 93.44 | 99.42 |
| CDY60533 | Canola | cytosol | 93.44 | 99.42 |
| AT4G18730.1 | Thale cress | cytosol | 98.36 | 98.9 |
| KRH55704 | Soybean | cytosol | 93.99 | 95.03 |
| KRH13277 | Soybean | cytosol | 93.99 | 95.03 |
| KRH25821 | Soybean | cytosol | 93.99 | 95.03 |
| KRH56423 | Soybean | cytosol | 93.99 | 95.03 |
| KRH62493 | Soybean | endoplasmic reticulum, nucleus | 93.99 | 95.03 |
| KRH55687 | Soybean | nucleus | 93.44 | 94.48 |
| Solyc02g086240.2.1 | Tomato | cytosol | 93.44 | 94.48 |
| PGSC0003DMT400020315 | Potato | cytosol | 93.44 | 94.48 |
| KRH25819 | Soybean | nucleus | 93.44 | 94.48 |
| PGSC0003DMT400027379 | Potato | cytosol | 93.44 | 94.48 |
| PGSC0003DMT400052643 | Potato | cytosol | 93.44 | 94.48 |
| PGSC0003DMT400067873 | Potato | cytosol | 93.44 | 94.48 |
| Solyc07g055230.2.1 | Tomato | cytosol | 93.44 | 94.48 |
| Solyc10g007980.2.1 | Tomato | cytosol | 93.44 | 94.48 |
| Solyc12g010930.1.1 | Tomato | extracellular | 93.44 | 94.48 |
| Os02t0235600-01 | Rice | cytosol, golgi, nucleus, plasma membrane | 93.44 | 93.96 |
| KXG29884 | Sorghum | cytosol | 92.35 | 92.86 |
| Os05t0207300-01 | Rice | plasma membrane | 92.35 | 92.86 |
| EES04818 | Sorghum | cytosol | 92.35 | 92.86 |
| EES04817 | Sorghum | cytosol | 92.35 | 92.86 |
| Os01t0205500-01 | Rice | nucleus | 91.8 | 92.31 |
| KXG31594 | Sorghum | cytosol | 91.8 | 92.31 |
| VIT_10s0003g01520.t01 | Wine grape | cytosol | 92.9 | 91.4 |
| KRH62765 | Soybean | cytosol | 51.37 | 91.26 |
| TraesCS1B01G144300.1 | Wheat | cytosol | 83.06 | 90.48 |
| CDX98322 | Canola | cytosol | 71.58 | 90.34 |
| TraesCS3B01G154600.1 | Wheat | cytosol | 87.98 | 89.44 |
| TraesCS3D01G137600.1 | Wheat | cytosol, extracellular, golgi | 87.98 | 89.44 |
| HORVU3Hr1G026060.1 | Barley | cytosol, plasma membrane | 87.98 | 89.44 |
| TraesCS3A01G136800.1 | Wheat | cytosol | 87.98 | 89.44 |
| EES17871 | Sorghum | cytosol | 37.7 | 88.46 |
| TraesCS1A01G125100.1 | Wheat | nucleus | 86.89 | 88.33 |
| TraesCS1D01G128800.1 | Wheat | cytosol, golgi, unclear | 86.34 | 87.78 |
| Os06t0550000-00 | Rice | plastid | 92.9 | 85.43 |
| HORVU0Hr1G003140.1 | Barley | mitochondrion | 33.33 | 83.56 |
| CDX88999 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 98.36 | 82.95 |
| KXG20149 | Sorghum | cytosol | 86.89 | 82.81 |
| KRH56320 | Soybean | cytosol, nucleus | 88.52 | 81.41 |
| HORVU1Hr1G032650.1 | Barley | mitochondrion | 40.44 | 81.32 |
| GSMUA_Achr9P28800_001 | Banana | cytosol | 13.66 | 80.65 |
| CDY26360 | Canola | plastid | 98.36 | 79.3 |
| HORVU7Hr1G044560.1 | Barley | mitochondrion | 40.98 | 78.95 |
| CDX87764 | Canola | mitochondrion | 97.81 | 78.51 |
| KRH16362 | Soybean | mitochondrion | 37.7 | 77.53 |
| HORVU1Hr1G028820.1 | Barley | mitochondrion | 86.34 | 76.7 |
| EES00248 | Sorghum | cytosol, plastid, vacuole | 19.67 | 73.47 |
| CDX71934 | Canola | cytosol | 98.36 | 70.59 |
| Solyc04g080150.1.1 | Tomato | unclear | 37.7 | 70.41 |
| CDY49245 | Canola | cytosol | 98.36 | 69.5 |
| HORVU7Hr1G062960.1 | Barley | cytosol, mitochondrion, plastid | 32.24 | 61.46 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 8.74 | 10.67 |
| Zm00001d000159_P001 | Maize | cytosol | 2.19 | 8.33 |
Protein Annotations
| MapMan:17.1.2.1.11 | Gene3D:3.30.1440.10 | GO:A0A078JEP2 | UniProt:A0A078JEP2 | EnsemblPlants:CDY64920 | ProteinID:CDY64920 |
| ProteinID:CDY64920.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00043862001 | InterPro:IPR022803 |
| PFAM:PF00281 | PFAM:PF00673 | PIRSF:PIRSF002161 | ScanProsite:PS00358 | PANTHER:PTHR11994 | PANTHER:PTHR11994:SF15 |
| InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_C | InterPro:Ribosomal_L5_CS | InterPro:Ribosomal_L5_N | InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 |
| UniParc:UPI0004EE693B | SEG:seg | : | : | : | : |
Description
BnaC07g50200DBnaC07g50200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEP2]
Coordinates
chrLK034599:-:20028..21263
Molecular Weight (calculated)
20976.5 Da
IEP (calculated)
10.484
GRAVY (calculated)
-0.490
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MQASEKKLSN PMRDIKVQKL VLNISVGESG DRLTRASKVL EQLSGQTPVF SKARYTVRSF GIRRNEKIAC YVTVRGDKAM QLLESGLKVK EYELLRRNFS
101: DTGCFGFGIQ EHIDLGIKYD PSTGIYGMDF YVVLERPGYR VARRRRCKTR VGIQHRVTKD DAMKWFQVKY EGVILNKSQN ITG
101: DTGCFGFGIQ EHIDLGIKYD PSTGIYGMDF YVVLERPGYR VARRRRCKTR VGIQHRVTKD DAMKWFQVKY EGVILNKSQN ITG
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.