Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0017g00140.t01 | Wine grape | cytosol | 91.51 | 96.04 |
| GSMUA_Achr9P28800_001 | Banana | cytosol | 22.64 | 77.42 |
| VIT_17s0053g00180.t01 | Wine grape | cytosol | 70.75 | 61.98 |
| HORVU0Hr1G003140.1 | Barley | mitochondrion | 30.19 | 43.84 |
| Solyc12g010930.1.1 | Tomato | extracellular | 65.09 | 38.12 |
| Solyc10g007980.2.1 | Tomato | cytosol | 65.09 | 38.12 |
| Solyc07g055230.2.1 | Tomato | cytosol | 65.09 | 38.12 |
| Solyc02g086240.2.1 | Tomato | cytosol | 65.09 | 38.12 |
| PGSC0003DMT400067873 | Potato | cytosol | 65.09 | 38.12 |
| PGSC0003DMT400052643 | Potato | cytosol | 65.09 | 38.12 |
| PGSC0003DMT400027379 | Potato | cytosol | 65.09 | 38.12 |
| PGSC0003DMT400020315 | Potato | cytosol | 65.09 | 38.12 |
| KXG31594 | Sorghum | cytosol | 64.15 | 37.36 |
| EES04817 | Sorghum | cytosol | 63.21 | 36.81 |
| Os05t0207300-01 | Rice | plasma membrane | 63.21 | 36.81 |
| Os02t0235600-01 | Rice | cytosol, golgi, nucleus, plasma membrane | 63.21 | 36.81 |
| KXG29884 | Sorghum | cytosol | 63.21 | 36.81 |
| EES04818 | Sorghum | cytosol | 63.21 | 36.81 |
| Os01t0205500-01 | Rice | nucleus | 62.26 | 36.26 |
| VIT_10s0003g01520.t01 | Wine grape | cytosol | 63.21 | 36.02 |
| TraesCS3D01G137600.1 | Wheat | cytosol, extracellular, golgi | 60.38 | 35.56 |
| TraesCS3B01G154600.1 | Wheat | cytosol | 60.38 | 35.56 |
| HORVU3Hr1G026060.1 | Barley | cytosol, plasma membrane | 60.38 | 35.56 |
| TraesCS3A01G136800.1 | Wheat | cytosol | 60.38 | 35.56 |
| TraesCS1A01G125100.1 | Wheat | nucleus | 60.38 | 35.56 |
| TraesCS1D01G128800.1 | Wheat | cytosol, golgi, unclear | 59.43 | 35.0 |
| KXG20149 | Sorghum | cytosol | 62.26 | 34.38 |
| VIT_12s0028g01800.t01 | Wine grape | cytosol | 55.66 | 34.1 |
| HORVU1Hr1G032650.1 | Barley | mitochondrion | 29.25 | 34.07 |
| HORVU7Hr1G044560.1 | Barley | mitochondrion | 30.19 | 33.68 |
| TraesCS1B01G144300.1 | Wheat | cytosol | 52.83 | 33.33 |
| Os06t0550000-00 | Rice | plastid | 62.26 | 33.17 |
| HORVU7Hr1G062960.1 | Barley | cytosol, mitochondrion, plastid | 28.3 | 31.25 |
| EES00248 | Sorghum | cytosol, plastid, vacuole | 14.15 | 30.61 |
| HORVU1Hr1G028820.1 | Barley | mitochondrion | 59.43 | 30.58 |
| Solyc04g080150.1.1 | Tomato | unclear | 27.36 | 29.59 |
| EES17871 | Sorghum | cytosol | 16.98 | 23.08 |
| KRH12095 | Soybean | cytosol, plastid, vacuole | 14.15 | 10.0 |
| Zm00001d000159_P001 | Maize | cytosol | 3.77 | 8.33 |
Protein Annotations
| Gene3D:3.30.1440.10 | MapMan:35.1 | ProteinID:CCB46324 | ProteinID:CCB46324.1 | UniProt:F6H228 | EMBL:FN595229 |
| GO:GO:0000027 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0019538 | GO:GO:0022625 | InterPro:IPR022803 | PFAM:PF00281 | PANTHER:PTHR11994 |
| PANTHER:PTHR11994:SF15 | InterPro:Ribosomal_L5 | InterPro:Ribosomal_L5_N | InterPro:Ribosomal_L5_dom_sf | SUPFAM:SSF55282 | UniParc:UPI0002109D4F |
| ArrayExpress:VIT_19s0014g02400 | EnsemblPlantsGene:VIT_19s0014g02400 | EnsemblPlants:VIT_19s0014g02400.t01 | : | : | : |
Description
No Description!
Coordinates
chr19:+:2514449..2514868
Molecular Weight (calculated)
11939.8 Da
IEP (calculated)
10.568
GRAVY (calculated)
-0.416
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEKKLSNP MRDIKAQKLV LNISIGESGD RLTRAAKVRN EKIACYVTVK GEKAMRLLES GLKVKEYELL LRSLEGLKFL STQGERTSRS HHLRVVCQMP
101: PKDAIT
101: PKDAIT
001: MASEKKLSNP MRDIKVQKLV LNISVGESGD RLTRASKVLE QLSGQTPVFS KARYTVRSFG IRRNEKIACY VTVRGEKAMQ LLESGLKVKE YELLRRNFSD
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
101: TGCFGFGIQE HIDLGIKYDP STGIYGMDFY VVLERPGYRV ARRRRCKTRV GIQHRVTKDD AMKWFQVKYE GVILNKSQNI TG
Arabidopsis Description
RPL11B60S ribosomal protein L11-2 [Source:UniProtKB/Swiss-Prot;Acc:P42794]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.