Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032828.1-P | Field mustard | cytosol | 94.59 | 99.43 |
| AT1G27400.1 | Thale cress | cytosol | 93.51 | 98.3 |
| CDY11812 | Canola | cytosol, nucleus, plastid | 92.97 | 90.05 |
| CDX90084 | Canola | endoplasmic reticulum | 93.51 | 89.64 |
| CDY56187 | Canola | mitochondrion | 95.68 | 88.94 |
| CDY03920 | Canola | extracellular, mitochondrion | 92.43 | 87.69 |
| Solyc03g111230.2.1 | Tomato | nucleus, unclear | 63.78 | 87.41 |
| Solyc06g071880.2.1 | Tomato | cytosol | 64.32 | 86.86 |
| PGSC0003DMT400039421 | Potato | nucleus | 80.0 | 85.55 |
| Solyc06g071870.2.1 | Tomato | nucleus | 80.54 | 85.14 |
| CDX96093 | Canola | endoplasmic reticulum, extracellular | 89.73 | 84.69 |
| PGSC0003DMT400069384 | Potato | nucleus | 80.0 | 84.57 |
| TraesCS5D01G174700.1 | Wheat | cytosol | 77.3 | 84.12 |
| TraesCS5B01G167100.1 | Wheat | cytosol, golgi, nucleus, unclear | 77.3 | 84.12 |
| TraesCS5A01G170300.1 | Wheat | cytosol | 77.3 | 84.12 |
| Os09t0258600-01 | Rice | nucleus | 77.3 | 83.63 |
| CDY12646 | Canola | cytosol, plastid | 89.73 | 82.59 |
| EER90536 | Sorghum | nucleus | 76.22 | 82.46 |
| CDY07422 | Canola | mitochondrion | 89.73 | 82.18 |
| CDY15709 | Canola | extracellular | 94.05 | 82.08 |
| TraesCS7B01G157300.1 | Wheat | golgi, unclear | 76.22 | 81.98 |
| TraesCS7D01G260500.1 | Wheat | cytosol | 76.22 | 81.98 |
| Zm00001d049815_P002 | Maize | cytosol | 75.68 | 81.87 |
| EER90537 | Sorghum | nucleus | 75.68 | 81.87 |
| CDY01809 | Canola | extracellular | 89.73 | 81.77 |
| TraesCS7A01G259500.1 | Wheat | cytosol | 75.68 | 81.4 |
| Zm00001d031611_P001 | Maize | cytosol | 75.14 | 81.29 |
| EES19208 | Sorghum | cytosol | 75.14 | 81.29 |
| Zm00001d037732_P002 | Maize | cytosol, extracellular, mitochondrion, plastid | 74.59 | 80.7 |
| Os08t0530200-01 | Rice | nucleus | 74.05 | 80.12 |
| GSMUA_Achr4P16010_001 | Banana | nucleus | 80.0 | 78.31 |
| CDY51350 | Canola | cytosol, plastid | 89.73 | 77.93 |
| VIT_01s0010g03370.t01 | Wine grape | plastid | 83.24 | 75.49 |
| HORVU5Hr1G052280.2 | Barley | plastid | 79.46 | 75.38 |
| VIT_01s0010g03380.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 84.32 | 72.56 |
| VIT_17s0000g01520.t01 | Wine grape | cytosol | 81.62 | 72.25 |
| HORVU7Hr1G054010.2 | Barley | mitochondrion | 76.76 | 71.0 |
| CDY28886 | Canola | extracellular | 89.73 | 70.64 |
| GSMUA_Achr5P14560_001 | Banana | cytosol | 80.0 | 67.89 |
| VIT_18s0001g05140.t01 | Wine grape | cytosol | 44.32 | 66.67 |
| GSMUA_Achr5P18680_001 | Banana | cytosol | 81.08 | 64.38 |
| Zm00001d010009_P003 | Maize | cytosol | 70.27 | 61.03 |
| OQU80827 | Sorghum | cytosol | 61.08 | 60.43 |
| GSMUA_Achr11P... | Banana | mitochondrion | 78.38 | 59.18 |
| Zm00001d003788_P001 | Maize | cytosol | 25.95 | 54.55 |
| CDX91455 | Canola | cytosol | 18.92 | 53.85 |
| Zm00001d033767_P002 | Maize | nucleus | 57.84 | 53.77 |
| Zm00001d011848_P001 | Maize | nucleus | 24.86 | 53.49 |
| Zm00001d038017_P001 | Maize | nucleus | 17.3 | 52.46 |
| Zm00001d049547_P001 | Maize | cytosol | 27.03 | 48.54 |
| CDY50459 | Canola | extracellular, plasma membrane | 18.92 | 45.45 |
| CDY50115 | Canola | cytosol | 22.16 | 44.57 |
| CDY65682 | Canola | cytosol | 19.46 | 40.0 |
| CDY24443 | Canola | cytosol | 42.7 | 29.81 |
Protein Annotations
| MapMan:17.1.2.1.17 | Gene3D:3.90.470.10 | GO:A0A078GQJ3 | UniProt:A0A078GQJ3 | EnsemblPlants:CDY27616 | ProteinID:CDY27616 |
| ProteinID:CDY27616.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00038365001 |
| InterPro:IPR036394 | HAMAP:MF_01331_A | PFAM:PF00237 | ScanProsite:PS00464 | PANTHER:PTHR11593 | PANTHER:PTHR11593:SF17 |
| InterPro:Ribosomal_L22 | InterPro:Ribosomal_L22/L17_CS | InterPro:Ribosomal_L22/L17_euk/arc | InterPro:Ribosomal_L22/L17_sf | SUPFAM:SSF54843 | TIGRFAMs:TIGR01038 |
| UniParc:UPI0004EDE7A1 | SEG:seg | : | : | : | : |
Description
BnaA09g27910DBnaA09g27910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQJ3]
Coordinates
chrLK032207:+:321293..322863
Molecular Weight (calculated)
20984.2 Da
IEP (calculated)
10.750
GRAVY (calculated)
-0.720
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MFFALCLFNQ VKYSQEPDNS TKSCKARGAD LRVHFKNTRE TAHAIRRLPL NKAKRYLEDV IAHKQAIPFT RFCRGVGRTA QAKNRHSNGQ GRWPAKSAQF
101: VLDLLKNAES NAEVKGLDVD ALFISHIQVN QAAKQRRRTY RAHGRINPYM SNPCHIELIL SEKEEPVKKE PETQLAAKSK KGASS
101: VLDLLKNAES NAEVKGLDVD ALFISHIQVN QAAKQRRRTY RAHGRINPYM SNPCHIELIL SEKEEPVKKE PETQLAAKSK KGASS
001: MVKYSQEPDN ITKSCKARGA DLRVHFKNTR ETAHAIRKLP LNKAKRYLED VIAHKQAIPF TRFCRGVGRT AQAKNRHSNG QGRWPAKSAQ FVLDLLKNAE
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKGASS
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKGASS
Arabidopsis Description
RPL17A60S ribosomal protein L17-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VI3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.