Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08728 | Soybean | cytosol, nucleus | 55.38 | 21.43 |
| KRH58763 | Soybean | nucleus | 53.85 | 19.34 |
| KRH31467 | Soybean | nucleus | 53.85 | 19.34 |
| KRG97436 | Soybean | nucleus | 53.85 | 19.34 |
| CDY27616 | Canola | cytosol | 53.85 | 18.92 |
| CDY11812 | Canola | cytosol, nucleus, plastid | 55.38 | 18.85 |
| CDX90084 | Canola | endoplasmic reticulum | 55.38 | 18.65 |
| KRH42661 | Soybean | nucleus | 53.85 | 18.52 |
| CDX96093 | Canola | endoplasmic reticulum, extracellular | 55.38 | 18.37 |
| CDY56187 | Canola | mitochondrion | 55.38 | 18.09 |
| CDY03920 | Canola | extracellular, mitochondrion | 53.85 | 17.95 |
| CDY12646 | Canola | cytosol, plastid | 55.38 | 17.91 |
| CDY07422 | Canola | mitochondrion | 55.38 | 17.82 |
| CDY01809 | Canola | extracellular | 55.38 | 17.73 |
| CDY15709 | Canola | extracellular | 55.38 | 16.98 |
| CDY51350 | Canola | cytosol, plastid | 55.38 | 16.9 |
| CDY50115 | Canola | cytosol | 23.08 | 16.3 |
| CDY28886 | Canola | extracellular | 55.38 | 15.32 |
| CDY65682 | Canola | cytosol | 15.38 | 11.11 |
| CDY24443 | Canola | cytosol | 33.85 | 8.3 |
| CDY50459 | Canola | extracellular, plasma membrane | 9.23 | 7.79 |
Protein Annotations
| Gene3D:3.90.470.10 | MapMan:35.2 | GO:A0A078DQ19 | EnsemblPlants:CDX91455 | ProteinID:CDX91455 | ProteinID:CDX91455.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00152788001 | InterPro:IPR036394 | InterPro:Ribosomal_L22/L17_sf | UniParc:UPI0004EE0192 |
Description
BnaC04g06950D
Coordinates
chrLK031867:-:1112928..1113523
Molecular Weight (calculated)
7867.6 Da
IEP (calculated)
10.458
GRAVY (calculated)
-0.477
Length
65 amino acids
Sequence
(BLAST)
(BLAST)
1: MVLEVLIRHS KDQGHLPVKS TQFRLDLLKN VESNAEVKRW RTYRVLEAKE RSFFLSFRDR LCYNV
001: MVKYSQEPDN QTKSCKARGS DLRVHFKNTR ETAHAIRKLP LIKAKRYLED VIAHKQAIPF TRFCRGVGRT AQAKNRHSNG QGRWPAKSAQ FVLDLLKNAE
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKSAA
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKSAA
Arabidopsis Description
RPL17B60S ribosomal protein L17-2 [Source:UniProtKB/Swiss-Prot;Acc:P51413]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.