Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08728 | Soybean | cytosol, nucleus | 42.39 | 23.21 |
| CDX91455 | Canola | cytosol | 16.3 | 23.08 |
| KRG97436 | Soybean | nucleus | 44.57 | 22.65 |
| CDY27616 | Canola | cytosol | 44.57 | 22.16 |
| KRH58763 | Soybean | nucleus | 43.48 | 22.1 |
| KRH31467 | Soybean | nucleus | 43.48 | 22.1 |
| CDY11812 | Canola | cytosol, nucleus, plastid | 44.57 | 21.47 |
| CDX90084 | Canola | endoplasmic reticulum | 44.57 | 21.24 |
| CDX96093 | Canola | endoplasmic reticulum, extracellular | 44.57 | 20.92 |
| KRH42661 | Soybean | nucleus | 42.39 | 20.63 |
| CDY56187 | Canola | mitochondrion | 44.57 | 20.6 |
| CDY03920 | Canola | extracellular, mitochondrion | 43.48 | 20.51 |
| CDY12646 | Canola | cytosol, plastid | 44.57 | 20.4 |
| CDY07422 | Canola | mitochondrion | 44.57 | 20.3 |
| CDY01809 | Canola | extracellular | 44.57 | 20.2 |
| CDY15709 | Canola | extracellular | 44.57 | 19.34 |
| CDY51350 | Canola | cytosol, plastid | 44.57 | 19.25 |
| CDY65682 | Canola | cytosol | 17.39 | 17.78 |
| CDY28886 | Canola | extracellular | 44.57 | 17.45 |
| CDY50459 | Canola | extracellular, plasma membrane | 11.96 | 14.29 |
| CDY24443 | Canola | cytosol | 28.26 | 9.81 |
Protein Annotations
| Gene3D:3.90.470.10 | MapMan:35.2 | GO:A0A078IGU4 | UniProt:A0A078IGU4 | EnsemblPlants:CDY50115 | ProteinID:CDY50115 |
| ProteinID:CDY50115.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00095925001 | InterPro:IPR036394 | InterPro:Ribosomal_L22/L17_sf |
| UniParc:UPI0004EE6C61 | : | : | : | : | : |
Description
BnaC04g32500DBnaC04g32500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGU4]
Coordinates
chrLK032882:-:11066..11669
Molecular Weight (calculated)
10613.9 Da
IEP (calculated)
10.299
GRAVY (calculated)
-0.051
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MASTLDFLFA FKDNNSIEFT YLSAQLFAKV SHYLRETEAR VNSGVKRKGI WKMGRWPVKF AQFGVYLLKN AEVKVLDVDA LFKSHIHMNQ VA
001: MVKYSQEPDN QTKSCKARGS DLRVHFKNTR ETAHAIRKLP LIKAKRYLED VIAHKQAIPF TRFCRGVGRT AQAKNRHSNG QGRWPAKSAQ FVLDLLKNAE
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKSAA
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKSAA
Arabidopsis Description
RPL17B60S ribosomal protein L17-2 [Source:UniProtKB/Swiss-Prot;Acc:P51413]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.