Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
28052459
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27616 | Canola | cytosol | 82.08 | 94.05 |
| CDY11812 | Canola | cytosol, nucleus, plastid | 83.96 | 93.19 |
| CDX90084 | Canola | endoplasmic reticulum | 83.96 | 92.23 |
| CDY56187 | Canola | mitochondrion | 84.43 | 89.95 |
| CDY03920 | Canola | extracellular, mitochondrion | 82.08 | 89.23 |
| CDX96093 | Canola | endoplasmic reticulum, extracellular | 81.13 | 87.76 |
| Solyc03g111230.2.1 | Tomato | nucleus, unclear | 55.66 | 87.41 |
| PGSC0003DMT400039421 | Potato | nucleus | 70.75 | 86.71 |
| Solyc06g071880.2.1 | Tomato | cytosol | 55.66 | 86.13 |
| Solyc06g071870.2.1 | Tomato | nucleus | 70.75 | 85.71 |
| CDY12646 | Canola | cytosol, plastid | 81.13 | 85.57 |
| CDY07422 | Canola | mitochondrion | 81.13 | 85.15 |
| PGSC0003DMT400069384 | Potato | nucleus | 70.28 | 85.14 |
| Os09t0258600-01 | Rice | nucleus | 68.4 | 84.8 |
| TraesCS5D01G174700.1 | Wheat | cytosol | 67.92 | 84.71 |
| TraesCS5B01G167100.1 | Wheat | cytosol, golgi, nucleus, unclear | 67.92 | 84.71 |
| TraesCS5A01G170300.1 | Wheat | cytosol | 67.92 | 84.71 |
| CDY01809 | Canola | extracellular | 80.66 | 84.24 |
| EER90536 | Sorghum | nucleus | 67.45 | 83.63 |
| EER90537 | Sorghum | nucleus | 66.98 | 83.04 |
| Zm00001d049815_P002 | Maize | cytosol | 66.98 | 83.04 |
| EES19208 | Sorghum | cytosol | 66.51 | 82.46 |
| Zm00001d031611_P001 | Maize | cytosol | 66.51 | 82.46 |
| TraesCS7B01G157300.1 | Wheat | golgi, unclear | 66.51 | 81.98 |
| TraesCS7D01G260500.1 | Wheat | cytosol | 66.51 | 81.98 |
| Zm00001d037732_P002 | Maize | cytosol, extracellular, mitochondrion, plastid | 66.04 | 81.87 |
| TraesCS7A01G259500.1 | Wheat | cytosol | 66.04 | 81.4 |
| Os08t0530200-01 | Rice | nucleus | 65.57 | 81.29 |
| CDY51350 | Canola | cytosol, plastid | 80.66 | 80.28 |
| GSMUA_Achr4P16010_001 | Banana | nucleus | 70.28 | 78.84 |
| VIT_01s0010g03370.t01 | Wine grape | plastid | 74.06 | 76.96 |
| HORVU5Hr1G052280.2 | Barley | plastid | 68.4 | 74.36 |
| VIT_17s0000g01520.t01 | Wine grape | cytosol | 73.11 | 74.16 |
| CDY28886 | Canola | extracellular | 81.13 | 73.19 |
| VIT_01s0010g03380.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 74.06 | 73.02 |
| HORVU7Hr1G054010.2 | Barley | mitochondrion | 66.51 | 70.5 |
| GSMUA_Achr5P14560_001 | Banana | cytosol | 71.23 | 69.27 |
| GSMUA_Achr5P18680_001 | Banana | cytosol | 73.58 | 66.95 |
| VIT_18s0001g05140.t01 | Wine grape | cytosol | 38.68 | 66.67 |
| Zm00001d010009_P003 | Maize | cytosol | 63.68 | 63.38 |
| OQU80827 | Sorghum | cytosol | 54.25 | 61.5 |
| GSMUA_Achr11P... | Banana | mitochondrion | 70.28 | 60.82 |
| Zm00001d033767_P002 | Maize | nucleus | 52.83 | 56.28 |
| CDX91455 | Canola | cytosol | 16.98 | 55.38 |
| Zm00001d003788_P001 | Maize | cytosol | 22.64 | 54.55 |
| Zm00001d011848_P001 | Maize | nucleus | 21.7 | 53.49 |
| Zm00001d038017_P001 | Maize | nucleus | 15.09 | 52.46 |
| Zm00001d049547_P001 | Maize | cytosol | 24.53 | 50.49 |
| CDY50459 | Canola | extracellular, plasma membrane | 16.51 | 45.45 |
| CDY50115 | Canola | cytosol | 19.34 | 44.57 |
| CDY65682 | Canola | cytosol | 17.45 | 41.11 |
| CDY24443 | Canola | cytosol | 38.21 | 30.57 |
Protein Annotations
| MapMan:17.1.2.1.17 | Gene3D:3.90.470.10 | GO:A0A078FS35 | UniProt:A0A078FS35 | EnsemblPlants:CDY15709 | ProteinID:CDY15709 |
| ProteinID:CDY15709.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00089932001 |
| InterPro:IPR036394 | HAMAP:MF_01331_A | PFAM:PF00237 | ScanProsite:PS00464 | PANTHER:PTHR11593 | PANTHER:PTHR11593:SF17 |
| InterPro:Ribosomal_L22 | InterPro:Ribosomal_L22/L17_CS | InterPro:Ribosomal_L22/L17_euk/arc | InterPro:Ribosomal_L22/L17_sf | SUPFAM:SSF54843 | TIGRFAMs:TIGR01038 |
| UniParc:UPI0004EEA4AD | SEG:seg | : | : | : | : |
Description
BnaA07g08800DBnaA07g08800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS35]
Coordinates
chrLK032056:-:693499..695175
Molecular Weight (calculated)
23914.8 Da
IEP (calculated)
10.871
GRAVY (calculated)
-0.725
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKGPNTPR RLGFHGSQLI YKLNHHLTEN LFSLAAMVKY SQEPDNSTKS CKARGADLRV HFKNTRETAH AIRKLPLIKA KRYLEDVIAH KQAIPFTRFC
101: RGVGRTAQAK NRHSNGQGRW PAKSAQFVLD LLKNAESNAE VKGLDVDALF ISHIQVNQAA KQRRRTYRAH GRINPYMSNP CHIELILSEK EEPVKKEPET
201: QLAAKSKKGA SS
101: RGVGRTAQAK NRHSNGQGRW PAKSAQFVLD LLKNAESNAE VKGLDVDALF ISHIQVNQAA KQRRRTYRAH GRINPYMSNP CHIELILSEK EEPVKKEPET
201: QLAAKSKKGA SS
001: MVKYSQEPDN ITKSCKARGA DLRVHFKNTR ETAHAIRKLP LNKAKRYLED VIAHKQAIPF TRFCRGVGRT AQAKNRHSNG QGRWPAKSAQ FVLDLLKNAE
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKGASS
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKGASS
Arabidopsis Description
RPL17A60S ribosomal protein L17-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VI3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.