Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G67430.1 | Thale cress | nucleus | 85.15 | 98.29 |
| Bra004225.1-P | Field mustard | nucleus | 84.65 | 97.71 |
| CDX96093 | Canola | endoplasmic reticulum, extracellular | 89.6 | 92.35 |
| CDY12646 | Canola | cytosol, plastid | 89.6 | 90.05 |
| CDY27616 | Canola | cytosol | 82.18 | 89.73 |
| CDY01809 | Canola | extracellular | 89.6 | 89.16 |
| CDY11812 | Canola | cytosol, nucleus, plastid | 84.16 | 89.01 |
| Solyc03g111230.2.1 | Tomato | nucleus, unclear | 58.91 | 88.15 |
| PGSC0003DMT400039421 | Potato | nucleus | 75.25 | 87.86 |
| CDX90084 | Canola | endoplasmic reticulum | 83.66 | 87.56 |
| Solyc06g071870.2.1 | Tomato | nucleus | 74.75 | 86.29 |
| Solyc06g071880.2.1 | Tomato | cytosol | 58.42 | 86.13 |
| CDY56187 | Canola | mitochondrion | 84.65 | 85.93 |
| PGSC0003DMT400069384 | Potato | nucleus | 74.26 | 85.71 |
| CDY03920 | Canola | extracellular, mitochondrion | 81.68 | 84.62 |
| Os09t0258600-01 | Rice | nucleus | 71.29 | 84.21 |
| TraesCS5A01G170300.1 | Wheat | cytosol | 70.79 | 84.12 |
| TraesCS5B01G167100.1 | Wheat | cytosol, golgi, nucleus, unclear | 70.79 | 84.12 |
| TraesCS5D01G174700.1 | Wheat | cytosol | 70.79 | 84.12 |
| CDY51350 | Canola | cytosol, plastid | 88.61 | 84.04 |
| CDY28886 | Canola | extracellular | 97.52 | 83.83 |
| EER90536 | Sorghum | nucleus | 70.3 | 83.04 |
| Zm00001d049815_P002 | Maize | cytosol | 69.8 | 82.46 |
| EER90537 | Sorghum | nucleus | 69.8 | 82.46 |
| EES19208 | Sorghum | cytosol | 69.31 | 81.87 |
| Zm00001d031611_P001 | Maize | cytosol | 69.31 | 81.87 |
| TraesCS7D01G260500.1 | Wheat | cytosol | 69.31 | 81.4 |
| TraesCS7B01G157300.1 | Wheat | golgi, unclear | 69.31 | 81.4 |
| Os08t0530200-01 | Rice | nucleus | 68.81 | 81.29 |
| Zm00001d037732_P002 | Maize | cytosol, extracellular, mitochondrion, plastid | 68.81 | 81.29 |
| CDY15709 | Canola | extracellular | 85.15 | 81.13 |
| TraesCS7A01G259500.1 | Wheat | cytosol | 68.81 | 80.81 |
| VIT_01s0010g03370.t01 | Wine grape | plastid | 77.23 | 76.47 |
| GSMUA_Achr4P16010_001 | Banana | nucleus | 71.29 | 76.19 |
| HORVU5Hr1G052280.2 | Barley | plastid | 72.28 | 74.87 |
| VIT_17s0000g01520.t01 | Wine grape | cytosol | 75.25 | 72.73 |
| HORVU7Hr1G054010.2 | Barley | mitochondrion | 70.3 | 71.0 |
| VIT_01s0010g03380.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 75.25 | 70.7 |
| GSMUA_Achr5P14560_001 | Banana | cytosol | 73.27 | 67.89 |
| VIT_18s0001g05140.t01 | Wine grape | cytosol | 41.09 | 67.48 |
| GSMUA_Achr5P18680_001 | Banana | cytosol | 74.75 | 64.81 |
| Zm00001d010009_P003 | Maize | cytosol | 64.36 | 61.03 |
| OQU80827 | Sorghum | cytosol | 56.44 | 60.96 |
| GSMUA_Achr11P... | Banana | mitochondrion | 73.76 | 60.82 |
| Zm00001d033767_P002 | Maize | nucleus | 56.44 | 57.29 |
| CDX91455 | Canola | cytosol | 17.82 | 55.38 |
| Zm00001d003788_P001 | Maize | cytosol | 22.77 | 52.27 |
| Zm00001d011848_P001 | Maize | nucleus | 21.78 | 51.16 |
| Zm00001d038017_P001 | Maize | nucleus | 14.85 | 49.18 |
| Zm00001d049547_P001 | Maize | cytosol | 24.75 | 48.54 |
| CDY50459 | Canola | extracellular, plasma membrane | 17.82 | 46.75 |
| CDY50115 | Canola | cytosol | 20.3 | 44.57 |
| CDY65682 | Canola | cytosol | 18.32 | 41.11 |
| CDY24443 | Canola | cytosol | 40.59 | 30.94 |
Protein Annotations
| MapMan:17.1.2.1.17 | Gene3D:3.90.470.10 | GO:A0A078F2X1 | UniProt:A0A078F2X1 | EnsemblPlants:CDY07422 | ProteinID:CDY07422 |
| ProteinID:CDY07422.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | GO:GO:0030529 | EnsemblPlantsGene:GSBRNA2T00124413001 |
| InterPro:IPR036394 | HAMAP:MF_01331_A | PFAM:PF00237 | ScanProsite:PS00464 | PANTHER:PTHR11593 | PANTHER:PTHR11593:SF17 |
| InterPro:Ribosomal_L22 | InterPro:Ribosomal_L22/L17_CS | InterPro:Ribosomal_L22/L17_euk/arc | InterPro:Ribosomal_L22/L17_sf | SUPFAM:SSF54843 | TIGRFAMs:TIGR01038 |
| UniParc:UPI0004EF33A5 | SEG:seg | : | : | : | : |
Description
BnaA07g25010DBnaA07g25010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2X1]
Coordinates
chrLK031978:-:637228..638660
Molecular Weight (calculated)
22964.6 Da
IEP (calculated)
10.778
GRAVY (calculated)
-0.702
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFSHYKVSS QLYSNRFCSR FLPLAAAMVK YSQEPDNQTK SCKARGSDLR VHFKNTRETA HAIRKLPLLK AKRYLEDVIA HKQAIPFTRF CRGVGRTAQA
101: KNRHSNGQGR WPAKSAQFVL DLLKNAESNA EVKGLDVDAL FISHIQVNQA AKQRRRTYRA HGRINPYMSN PCHIELILSE KEESVKKEPE TQLAAKSKKS
201: SA
101: KNRHSNGQGR WPAKSAQFVL DLLKNAESNA EVKGLDVDAL FISHIQVNQA AKQRRRTYRA HGRINPYMSN PCHIELILSE KEESVKKEPE TQLAAKSKKS
201: SA
001: MVKYSQEPDN QTKSCKARGS DLRVHFKNTR ETAHAIRKLP LIKAKRYLED VIAHKQAIPF TRFCRGVGRT AQAKNRHSNG QGRWPAKSAQ FVLDLLKNAE
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKSAA
101: SNAEVKGLDV DALFISHIQV NQAAKQRRRT YRAHGRINPY MSNPCHIELI LSEKEEPVKK EPETQLAAKS KKSAA
Arabidopsis Description
RPL17B60S ribosomal protein L17-2 [Source:UniProtKB/Swiss-Prot;Acc:P51413]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.