Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011848_P001 | Maize | nucleus | 98.36 | 69.77 |
| Zm00001d003788_P001 | Maize | cytosol | 93.44 | 64.77 |
| Zm00001d049547_P001 | Maize | cytosol | 90.16 | 53.4 |
| Solyc03g111230.2.1 | Tomato | nucleus, unclear | 50.82 | 22.96 |
| Solyc06g071880.2.1 | Tomato | cytosol | 49.18 | 21.9 |
| Zm00001d049815_P002 | Maize | cytosol | 59.02 | 21.05 |
| Zm00001d031611_P001 | Maize | cytosol | 59.02 | 21.05 |
| Zm00001d037732_P002 | Maize | cytosol, extracellular, mitochondrion, plastid | 57.38 | 20.47 |
| GSMUA_Achr4P16010_001 | Banana | nucleus | 62.3 | 20.11 |
| KRH31467 | Soybean | nucleus | 59.02 | 19.89 |
| KRH58763 | Soybean | nucleus | 59.02 | 19.89 |
| Os08t0530200-01 | Rice | nucleus | 55.74 | 19.88 |
| TraesCS7D01G260500.1 | Wheat | cytosol | 55.74 | 19.77 |
| TraesCS7B01G157300.1 | Wheat | golgi, unclear | 55.74 | 19.77 |
| TraesCS7A01G259500.1 | Wheat | cytosol | 55.74 | 19.77 |
| KRH42661 | Soybean | nucleus | 59.02 | 19.05 |
| KRG97436 | Soybean | nucleus | 54.1 | 18.23 |
| Bra032828.1-P | Field mustard | cytosol | 52.46 | 18.18 |
| AT1G27400.1 | Thale cress | cytosol | 52.46 | 18.18 |
| PGSC0003DMT400039421 | Potato | nucleus | 50.82 | 17.92 |
| AT1G67430.1 | Thale cress | nucleus | 50.82 | 17.71 |
| Zm00001d033767_P002 | Maize | nucleus | 57.38 | 17.59 |
| CDY27616 | Canola | cytosol | 52.46 | 17.3 |
| KRH08728 | Soybean | cytosol, nucleus | 47.54 | 17.26 |
| VIT_01s0010g03370.t01 | Wine grape | plastid | 57.38 | 17.16 |
| Bra033999.1-P | Field mustard | nucleus | 49.18 | 17.14 |
| Solyc06g071870.2.1 | Tomato | nucleus | 49.18 | 17.14 |
| PGSC0003DMT400069384 | Potato | nucleus | 49.18 | 17.14 |
| OQU80827 | Sorghum | cytosol | 52.46 | 17.11 |
| HORVU7Hr1G054010.2 | Barley | mitochondrion | 55.74 | 17.0 |
| CDY11812 | Canola | cytosol, nucleus, plastid | 52.46 | 16.75 |
| VIT_17s0000g01520.t01 | Wine grape | cytosol | 57.38 | 16.75 |
| CDX90084 | Canola | endoplasmic reticulum | 52.46 | 16.58 |
| GSMUA_Achr5P14560_001 | Banana | cytosol | 59.02 | 16.51 |
| Zm00001d010009_P003 | Maize | cytosol | 57.38 | 16.43 |
| CDY03920 | Canola | extracellular, mitochondrion | 52.46 | 16.41 |
| CDY56187 | Canola | mitochondrion | 52.46 | 16.08 |
| GSMUA_Achr5P18680_001 | Banana | cytosol | 60.66 | 15.88 |
| VIT_01s0010g03380.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 55.74 | 15.81 |
| Bra010943.1-P | Field mustard | cytosol | 52.46 | 15.76 |
| Bra004225.1-P | Field mustard | nucleus | 44.26 | 15.43 |
| CDX96093 | Canola | endoplasmic reticulum, extracellular | 49.18 | 15.31 |
| CDY15709 | Canola | extracellular | 52.46 | 15.09 |
| CDY12646 | Canola | cytosol, plastid | 49.18 | 14.93 |
| CDY07422 | Canola | mitochondrion | 49.18 | 14.85 |
| CDY01809 | Canola | extracellular | 49.18 | 14.78 |
| CDY51350 | Canola | cytosol, plastid | 49.18 | 14.08 |
| GSMUA_Achr11P... | Banana | mitochondrion | 55.74 | 13.88 |
| CDY28886 | Canola | extracellular | 49.18 | 12.77 |
| VIT_18s0001g05140.t01 | Wine grape | cytosol | 14.75 | 7.32 |
Protein Annotations
| MapMan:35.2 | UniProt:A0A1D6M2R7 | ProteinID:AQK85476.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 |
| PANTHER:PTHR11593 | PANTHER:PTHR11593:SF17 | InterPro:Ribosomal_L22/L17_euk/arc | UniParc:UPI0008453E33 | EnsemblPlantsGene:Zm00001d038017 | EnsemblPlants:Zm00001d038017_P001 |
| EnsemblPlants:Zm00001d038017_T001 | SEG:seg | : | : | : | : |
Description
60S ribosomal protein L17-2
Coordinates
chr6:-:145293656..145296675
Molecular Weight (calculated)
7432.1 Da
IEP (calculated)
10.586
GRAVY (calculated)
-0.887
Length
61 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKAKRYLDD IIAHRQSIVF RRYCAYMSSP CHSELFLLEK EDPMKKEVRK RVKRSESRWG R
001: MVKYSQEPDN QTKSCKARGS DLRVHFKNTR ETAHAIRKLP LIKAKRYLED VIAHKQAIPF TRFCRGVGRT AQAKNRHSNG QGRWPAKSAQ FVLDLLKNAE
101: SNAELILSEK EEPVKKEPET QLAAKSKKSA A
101: SNAELILSEK EEPVKKEPET QLAAKSKKSA A
Arabidopsis Description
RPL17B60S ribosomal protein L17-2 [Source:UniProtKB/Swiss-Prot;Acc:P51413]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.