Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51748 | Canola | cytosol | 98.85 | 97.18 |
| CDY21161 | Canola | cytosol | 92.53 | 89.94 |
| KRH70169 | Soybean | cytosol | 57.47 | 68.03 |
| AT3G03800.1 | Thale cress | cytosol | 93.1 | 52.94 |
| CDY29963 | Canola | cytosol | 91.95 | 51.61 |
| Bra031972.1-P | Field mustard | cytosol | 81.03 | 50.36 |
| VIT_08s0032g00440.t01 | Wine grape | cytosol | 70.11 | 39.74 |
| KRH08507 | Soybean | cytosol | 69.54 | 39.29 |
| Solyc10g081580.1.1 | Tomato | cytosol, plastid | 69.54 | 39.03 |
| PGSC0003DMT400072284 | Potato | cytosol | 69.54 | 39.03 |
| Solyc01g056810.2.1 | Tomato | cytosol | 50.0 | 34.39 |
| GSMUA_Achr2P01540_001 | Banana | cytosol | 56.9 | 33.22 |
| TraesCS2D01G248900.1 | Wheat | cytosol | 57.47 | 33.11 |
| TraesCS2B01G263700.1 | Wheat | cytosol | 57.47 | 33.11 |
| EER98026 | Sorghum | cytosol | 56.9 | 32.67 |
| Zm00001d007902_P001 | Maize | mitochondrion, plasma membrane | 56.9 | 32.57 |
| Os06t0168500-01 | Rice | plasma membrane | 55.75 | 31.8 |
| HORVU5Hr1G026120.1 | Barley | cytosol | 55.17 | 31.37 |
| TraesCS7B01G394300.1 | Wheat | cytosol | 54.6 | 31.25 |
| TraesCS7A01G481800.1 | Wheat | cytosol | 54.6 | 31.25 |
| HORVU6Hr1G095330.1 | Barley | cytosol | 53.45 | 30.9 |
| TraesCS5B01G034800.1 | Wheat | cytosol | 53.45 | 30.69 |
| HORVU2Hr1G057350.2 | Barley | cytosol | 57.47 | 30.4 |
| EES16084 | Sorghum | cytosol | 53.45 | 30.29 |
| TraesCS5B01G102700.1 | Wheat | cytosol | 52.87 | 30.07 |
| TraesCS5B01G035600.1 | Wheat | cytosol | 52.87 | 29.77 |
| TraesCS5A01G096800.1 | Wheat | cytosol | 52.3 | 29.74 |
| Zm00001d041716_P002 | Maize | cytosol | 54.02 | 29.65 |
| TraesCS2A01G246600.1 | Wheat | cytosol | 56.32 | 29.43 |
| TraesCS5D01G109500.1 | Wheat | cytosol | 51.72 | 29.41 |
| GSMUA_Achr7P16680_001 | Banana | plasma membrane | 62.64 | 29.14 |
| GSMUA_Achr2P17410_001 | Banana | cytosol | 48.28 | 28.47 |
| Zm00001d018867_P002 | Maize | plastid | 57.47 | 25.58 |
| TraesCS5A01G240200.3 | Wheat | mitochondrion | 29.31 | 23.08 |
| CDY21958 | Canola | cytosol | 38.51 | 21.97 |
| CDY70107 | Canola | cytosol | 37.36 | 21.81 |
| CDY48554 | Canola | cytosol | 37.93 | 21.64 |
| CDY20986 | Canola | cytosol | 36.78 | 21.48 |
| CDY34656 | Canola | cytosol | 36.78 | 21.48 |
| CDY34843 | Canola | cytosol | 36.78 | 21.48 |
| CDX97943 | Canola | cytosol | 35.63 | 20.81 |
| CDY19350 | Canola | cytosol | 35.63 | 20.81 |
| CDY01061 | Canola | cytosol, plastid | 37.93 | 19.7 |
| CDY08492 | Canola | cytosol | 37.93 | 19.47 |
| CDY70958 | Canola | cytosol | 36.78 | 19.22 |
| CDX73851 | Canola | cytosol | 36.78 | 19.16 |
| CDY23212 | Canola | cytosol | 37.36 | 18.95 |
| CDX90604 | Canola | cytosol, golgi, nucleus | 35.63 | 18.56 |
| CDY29079 | Canola | cytosol, golgi, nucleus | 35.06 | 18.15 |
| CDY46302 | Canola | cytosol | 28.74 | 17.36 |
| CDX95050 | Canola | cytosol | 30.46 | 17.26 |
| CDX93553 | Canola | cytosol | 30.46 | 17.26 |
| CDX97497 | Canola | cytosol | 29.31 | 16.83 |
| CDY31137 | Canola | cytosol | 29.31 | 16.78 |
| CDY29223 | Canola | cytosol | 27.59 | 16.72 |
| CDY20921 | Canola | cytosol | 27.01 | 16.43 |
| CDY25157 | Canola | cytosol | 16.09 | 13.86 |
| TraesCS1A01G088800.1 | Wheat | cytosol | 17.82 | 10.8 |
| CDY21160 | Canola | cytosol | 0.0 | 0.0 |
| CDX95336 | Canola | cytosol | 0.0 | 0.0 |
| CDY50666 | Canola | cytosol | 0.0 | 0.0 |
| CDY51747 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY50665 | EnsemblPlantsGene:GSBRNA2T00097224001 | Gene3D:1.20.58.70 | GO:A0A078II30 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | InterPro:SNARE | InterPro:Syntaxin_N | ncoils:Coil |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF144 | PFAM:PF00804 | ProteinID:CDY50665 | ProteinID:CDY50665.1 | SEG:seg |
| SMART:SM00503 | SUPFAM:SSF47661 | UniParc:UPI0004EE58F6 | UniProt:A0A078II30 | MapMan:22.7.1.1 | : |
Description
BnaC05g48010DBnaC05g48010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078II30]
Coordinates
chrLK032929:+:89127..90732
Molecular Weight (calculated)
19731.3 Da
IEP (calculated)
10.037
GRAVY (calculated)
-1.059
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLLKGSSE FSRDRSNRSD TESGHGPGNS GDLGLAGFFN KVQEIEKQYE KLDKHLKKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG KISRFIKGKI
101: EELDRENRSK PGCGKGTGVD RTRTATTIAV KKKFKDKISE FQTLRQNIHQ EYREVVERRV FTVTGQQADE EAMT
101: EELDRENRSK PGCGKGTGVD RTRTATTIAV KKKFKDKISE FQTLRQNIHQ EYREVVERRV FTVTGQQADE EAMT
001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
Arabidopsis Description
SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.