Factsheet for TraesCS5B01G035600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G034800.1	Wheat	cytosol	88.35	90.1
TraesCS2B01G263700.1	Wheat	cytosol	82.52	84.44
TraesCS7B01G394300.1	Wheat	cytosol	80.26	81.58
EER98026	Sorghum	cytosol	77.35	78.88
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	77.35	78.62
Solyc01g056810.2.1	Tomato	cytosol	52.75	64.43
Solyc10g081580.1.1	Tomato	cytosol, plastid	62.78	62.58
Bra005968.1-P	Field mustard	cytosol	61.49	62.5
PGSC0003DMT400072284	Potato	cytosol	62.46	62.26
VIT_08s0032g00440.t01	Wine grape	cytosol	61.81	62.22
Bra009318.1-P	Field mustard	cytosol	60.84	62.05
KRH08507	Soybean	cytosol	60.84	61.04
Bra028672.1-P	Field mustard	cytosol	59.55	60.73
Zm00001d018867_P002	Maize	plastid	76.38	60.36
GSMUA_Achr2P01540_001	Banana	cytosol	57.28	59.4
AT5G08080.3	Thale cress	cytosol	60.52	59.37
CDY21160	Canola	cytosol	25.24	58.65
KRH70169	Soybean	cytosol	27.83	58.5
TraesCS2B01G244700.1	Wheat	cytosol	56.63	57.76
AT3G03800.1	Thale cress	cytosol	55.99	56.54
CDY51747	Canola	cytosol	24.6	56.3
CDY50666	Canola	cytosol	24.27	55.56
CDY29963	Canola	cytosol	55.02	54.84
CDY51748	Canola	cytosol	31.07	54.24
Bra031972.1-P	Field mustard	cytosol	48.87	53.93
Bra036431.1-P	Field mustard	cytosol	48.22	53.6
TraesCS5B01G102700.1	Wheat	cytosol	52.43	52.94
CDY50665	Canola	cytosol	29.77	52.87
CDY21161	Canola	cytosol	30.42	52.51
TraesCS4B01G067100.1	Wheat	cytosol	22.01	41.72
TraesCS7B01G260100.1	Wheat	cytosol	38.84	39.22
TraesCS5B01G427600.1	Wheat	cytosol, golgi, nucleus	40.45	39.06
TraesCS6B01G211000.1	Wheat	cytosol	37.22	37.7
TraesCS4B01G067200.1	Wheat	cytosol	35.6	35.03
TraesCS1A01G088800.1	Wheat	cytosol	30.74	33.1
TraesCS5A01G240200.3	Wheat	mitochondrion	22.98	32.13
TraesCS2B01G238200.2	Wheat	cytosol	25.89	25.97
TraesCS6B01G175300.1	Wheat	cytosol	21.68	21.9

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	ncoils:Coil	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016192	InterPro:IPR000727	PFAM:PF00804	PFAM:PF05739
PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF153	SMART:SM00397	SMART:SM00503	InterPro:SNARE
SUPFAM:SSF47661	InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	EnsemblPlantsGene:TraesCS5B01G035600	EnsemblPlants:TraesCS5B01G035600.1
TIGR:cd00179	TIGR:cd15848	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:+:38516149..38519971

Molecular Weight (calculated)

34714.4 Da

IEP (calculated)

9.827

GRAVY (calculated)

-0.417

Length

309 amino acids

Sequence
(BLAST)

001: MNNLLTDSFE LPPWDSSRDW GDVEMGMHQP GASDNLKGFF KKVHGIKSLI AKLTSLLTKL QTANEESKAV TKASAMKAIK KQMEKDIDAV MKIARMAKTK
101: IDELEKDNLS NTEKPGCGKG SAVDQLREQT TGAVKKKLKK RMDDFQVLRE SIRQEYREVV ERRVFIVTGN RPDEQTIDDL IETGRSKQIF KDAVQQQGRG
201: RILDTVAEIQ ERHDAVRDLE RKLVELQQIV LDTAVLVDAQ GDMTDDIAKH VSKATNYVQE GVEALQKAKK LQKNSRMCMC SAIIVLLLIL VIVVLVVIKP
301: GKKKLLSTT

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.