Factsheet for TraesCS5B01G034800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G035600.1	Wheat	cytosol	90.1	88.35
TraesCS2B01G263700.1	Wheat	cytosol	84.82	85.1
TraesCS7B01G394300.1	Wheat	cytosol	82.18	81.91
EER98026	Sorghum	cytosol	79.87	79.87
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	79.87	79.61
Solyc01g056810.2.1	Tomato	cytosol	55.12	66.01
Solyc10g081580.1.1	Tomato	cytosol, plastid	64.69	63.23
VIT_08s0032g00440.t01	Wine grape	cytosol	64.03	63.19
Bra005968.1-P	Field mustard	cytosol	63.37	63.16
Bra009318.1-P	Field mustard	cytosol	62.71	62.71
PGSC0003DMT400072284	Potato	cytosol	64.03	62.58
KRH08507	Soybean	cytosol	63.04	62.01
Bra028672.1-P	Field mustard	cytosol	61.39	61.39
Zm00001d018867_P002	Maize	plastid	78.88	61.13
CDY21160	Canola	cytosol	26.73	60.9
AT5G08080.3	Thale cress	cytosol	62.38	60.0
GSMUA_Achr2P01540_001	Banana	cytosol	58.75	59.73
CDY51747	Canola	cytosol	26.4	59.26
CDY50666	Canola	cytosol	26.07	58.52
AT3G03800.1	Thale cress	cytosol	57.76	57.19
KRH70169	Soybean	cytosol	27.72	57.14
TraesCS2B01G244700.1	Wheat	cytosol	57.1	57.1
CDY29963	Canola	cytosol	56.77	55.48
Bra031972.1-P	Field mustard	cytosol	51.16	55.36
CDY51748	Canola	cytosol	32.01	54.8
Bra036431.1-P	Field mustard	cytosol	49.51	53.96
TraesCS5B01G102700.1	Wheat	cytosol	54.13	53.59
CDY50665	Canola	cytosol	30.69	53.45
CDY21161	Canola	cytosol	30.69	51.96
TraesCS4B01G067100.1	Wheat	cytosol	24.09	44.79
TraesCS7B01G260100.1	Wheat	cytosol	40.92	40.52
TraesCS6B01G211000.1	Wheat	cytosol	39.6	39.34
TraesCS5B01G427600.1	Wheat	cytosol, golgi, nucleus	40.92	38.75
TraesCS4B01G067200.1	Wheat	cytosol	36.96	35.67
TraesCS1A01G088800.1	Wheat	cytosol	33.0	34.84
TraesCS5A01G240200.3	Wheat	mitochondrion	24.42	33.48
TraesCS2B01G238200.2	Wheat	cytosol	27.39	26.95
TraesCS6B01G175300.1	Wheat	cytosol	23.1	22.88

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	ncoils:Coil	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016192	InterPro:IPR000727	PFAM:PF00804	PFAM:PF05739
PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF153	SMART:SM00397	SMART:SM00503	InterPro:SNARE
SUPFAM:SSF47661	InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	EnsemblPlantsGene:TraesCS5B01G034800	EnsemblPlants:TraesCS5B01G034800.1
TIGR:cd00179	TIGR:cd15848	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5B:-:37813494..37817103

Molecular Weight (calculated)

34192.7 Da

IEP (calculated)

8.461

GRAVY (calculated)

-0.399

Length

303 amino acids

Sequence
(BLAST)

001: MNNLLTDSFE LLRRDSSRDE GDVEMGIHQL DASDNLKGFL NKVNGIKSLI AKLTSLLTKL QTANEESKVV TKASAMKAIK KQMEKDIDAV MKIARMAKTK
101: IDELEKDNLS NTEKPGCGKG SVVDQLREQT TGAVKKKLKK RMDDFQVLRE SIRQEYREVV ERRVFTVTGN RPDEQTIDDL IETGRSEHIF KDAVQQQGRG
201: QILDTLAEIQ ERHDAVRDLE RKLLELQQIF LDMAVLVDAQ GDMTDDIVTH VSKASDYIQQ SLDALQKAKK LQKNSRMCMC SAIIVLLLIV VIVVLVVIKP
301: GKK

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.