CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70169	Soybean	cytosol	45.45	95.24
VIT_08s0032g00440.t01	Wine grape	cytosol	83.77	84.04
Solyc01g056810.2.1	Tomato	cytosol	68.18	83.0
PGSC0003DMT400072284	Potato	cytosol	79.87	79.35
Solyc10g081580.1.1	Tomato	cytosol, plastid	79.87	79.35
CDY21160	Canola	cytosol	34.09	78.95
CDY51747	Canola	cytosol	34.42	78.52
CDY50666	Canola	cytosol	33.12	75.56
AT3G03800.1	Thale cress	cytosol	74.35	74.84
CDY29963	Canola	cytosol	74.35	73.87
Bra031972.1-P	Field mustard	cytosol	66.23	72.86
Bra036431.1-P	Field mustard	cytosol	64.61	71.58
CDY51748	Canola	cytosol	40.58	70.62
CDY50665	Canola	cytosol	39.29	69.54
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	68.18	69.08
CDY21161	Canola	cytosol	39.94	68.72
EER98026	Sorghum	cytosol	67.53	68.65
GSMUA_Achr2P17410_001	Banana	cytosol	65.26	68.14
TraesCS2B01G263700.1	Wheat	cytosol	66.56	67.88
TraesCS2D01G248900.1	Wheat	cytosol	66.56	67.88
GSMUA_Achr2P01540_001	Banana	cytosol	64.94	67.11
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	66.23	66.67
TraesCS7B01G394300.1	Wheat	cytosol	64.94	65.79
TraesCS7A01G481800.1	Wheat	cytosol	64.61	65.46
HORVU6Hr1G095330.1	Barley	cytosol	63.96	65.45
KRH26811	Soybean	cytosol	64.94	65.36
HORVU5Hr1G026120.1	Barley	cytosol	63.31	63.73
Os06t0168500-01	Rice	plasma membrane	62.66	63.28
TraesCS5B01G034800.1	Wheat	cytosol	62.01	63.04
TraesCS5A01G096800.1	Wheat	cytosol	62.01	62.42
TraesCS5D01G109500.1	Wheat	cytosol	62.01	62.42
TraesCS5B01G102700.1	Wheat	cytosol	61.69	62.09
Zm00001d041716_P002	Maize	cytosol	63.31	61.51
EES16084	Sorghum	cytosol	61.04	61.24
TraesCS5B01G035600.1	Wheat	cytosol	61.04	60.84
TraesCS2A01G246600.1	Wheat	cytosol	65.58	60.66
HORVU2Hr1G057350.2	Barley	cytosol	63.31	59.27
GSMUA_Achr7P16680_001	Banana	plasma membrane	71.75	59.09
Zm00001d018867_P002	Maize	plastid	67.21	52.94
KRH10761	Soybean	cytosol	45.13	45.72
KRH21567	Soybean	cytosol	44.81	45.39
KRH41917	Soybean	cytosol	44.81	45.39
KRH72168	Soybean	cytosol	42.53	42.95
KRH32862	Soybean	cytosol	42.21	42.48
KRH72169	Soybean	cytosol	45.13	41.49
KRH32861	Soybean	mitochondrion	44.16	40.96
KRG96271	Soybean	cytosol, golgi, mitochondrion	38.31	39.2
KRH08461	Soybean	cytosol	40.26	38.51
KRH68016	Soybean	cytosol	36.36	38.1
KRH70119	Soybean	cytosol	39.29	38.05
KRH28699	Soybean	cytosol	33.12	34.11
KRH76768	Soybean	cytosol	32.47	33.44
TraesCS1A01G088800.1	Wheat	cytosol	29.22	31.36
TraesCS5A01G240200.3	Wheat	mitochondrion	21.43	29.86
KRH43180	Soybean	cytosol	24.03	28.79
KRH59335	Soybean	cytosol	12.34	25.0

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	EMBL:ACUP02010182	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G154200
GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810	GO:GO:0006886
GO:GO:0006887	GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0012505	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201	GO:GO:0048278	GO:GO:0061025
UniProt:I1MNV4	InterPro:IPR000727	EnsemblPlants:KRH08507	ProteinID:KRH08507	ProteinID:KRH08507.1	PFAM:PF00804
PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF144	SMART:SM00397
SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N	TMHMM:TMhelix
InterPro:T_SNARE_dom	UniParc:UPI00023D6DB9	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:31463230..31469750

Molecular Weight (calculated)

34839.1 Da

IEP (calculated)

8.217

GRAVY (calculated)

-0.544

Length

308 amino acids

Sequence
(BLAST)

001: MNDLLTESFE IPRGQGHGGG GDIELGEYAR NSGDLGLDSF FKKVQELDKQ YAKLDKLLKK LQDAHEESKA VTKAPSMKAI KQRMEKDVDE VKKTAHYLKT
101: KIEELDKENL ANRQKPGCGK GSGVDRSRTA TTISLKKKLK DKMAEFQTLR EAIHQEYREV VERRVFTVTG TRADEETIDR LIETGDSEQI FQKAIQEQGR
201: GQIMDTLAEI QERHEAVRDV ERKLLDLQQI FLDIAVLVDA QGDMLDNIET QVSSAVDHVQ QGNNALQKAK KLQRNSRKWM CIAIMILLIV VIIIVVAVIK
301: PWVTKKGA

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.