CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21160	Canola	cytosol	42.58	99.25
Bra036431.1-P	Field mustard	cytosol	88.06	98.2
CDY51747	Canola	cytosol	42.26	97.04
CDY21161	Canola	cytosol	55.81	96.65
CDY50666	Canola	cytosol	41.29	94.81
AT3G03800.1	Thale cress	cytosol	92.58	93.79
CDY51748	Canola	cytosol	52.9	92.66
CDY50665	Canola	cytosol	51.61	91.95
Solyc01g056810.2.1	Tomato	cytosol	61.61	75.49
KRH08507	Soybean	cytosol	73.87	74.35
VIT_08s0032g00440.t01	Wine grape	cytosol	73.23	73.94
Solyc10g081580.1.1	Tomato	cytosol, plastid	70.97	70.97
PGSC0003DMT400072284	Potato	cytosol	70.97	70.97
KRH70169	Soybean	cytosol	33.23	70.07
GSMUA_Achr2P17410_001	Banana	cytosol	60.0	63.05
GSMUA_Achr2P01540_001	Banana	cytosol	59.03	61.41
TraesCS2D01G248900.1	Wheat	cytosol	58.71	60.26
TraesCS2B01G263700.1	Wheat	cytosol	58.71	60.26
EER98026	Sorghum	cytosol	58.71	60.07
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	58.71	59.87
Os06t0168500-01	Rice	plasma membrane	58.06	59.02
HORVU5Hr1G026120.1	Barley	cytosol	57.74	58.5
TraesCS7A01G481800.1	Wheat	cytosol	57.1	58.22
TraesCS7B01G394300.1	Wheat	cytosol	57.1	58.22
HORVU6Hr1G095330.1	Barley	cytosol	56.13	57.81
TraesCS5A01G096800.1	Wheat	cytosol	56.45	57.19
TraesCS5D01G109500.1	Wheat	cytosol	56.45	57.19
TraesCS5B01G102700.1	Wheat	cytosol	56.13	56.86
TraesCS5B01G034800.1	Wheat	cytosol	55.48	56.77
EES16084	Sorghum	cytosol	55.81	56.35
Zm00001d041716_P002	Maize	cytosol	57.1	55.84
GSMUA_Achr7P16680_001	Banana	plasma membrane	66.45	55.08
TraesCS5B01G035600.1	Wheat	cytosol	54.84	55.02
TraesCS2A01G246600.1	Wheat	cytosol	58.06	54.05
HORVU2Hr1G057350.2	Barley	cytosol	56.77	53.5
Zm00001d018867_P002	Maize	plastid	59.03	46.8
CDY70107	Canola	cytosol	42.58	44.3
CDY34656	Canola	cytosol	42.58	44.3
CDY21958	Canola	cytosol	43.55	44.26
CDY34843	Canola	cytosol	42.26	43.96
CDY20986	Canola	cytosol	42.26	43.96
CDY48554	Canola	cytosol	43.23	43.93
CDX97943	Canola	cytosol	41.94	43.62
CDY19350	Canola	cytosol	41.61	43.29
CDY01061	Canola	cytosol, plastid	45.48	42.09
CDY70958	Canola	cytosol	44.84	41.74
CDX73851	Canola	cytosol	44.84	41.62
CDY23212	Canola	cytosol	45.81	41.4
CDY08492	Canola	cytosol	45.16	41.3
CDY29079	Canola	cytosol, golgi, nucleus	44.52	41.07
CDX90604	Canola	cytosol, golgi, nucleus	43.87	40.72
CDX93553	Canola	cytosol	36.77	37.13
CDX97497	Canola	cytosol	36.13	36.96
CDX95050	Canola	cytosol	36.45	36.81
CDY31137	Canola	cytosol	35.48	36.18
CDX95336	Canola	cytosol	11.94	35.24
CDY25157	Canola	cytosol	22.26	34.16
CDY46302	Canola	cytosol	29.03	31.25
CDY29223	Canola	cytosol	28.06	30.31
CDY20921	Canola	cytosol	27.74	30.07
TraesCS1A01G088800.1	Wheat	cytosol	27.42	29.62
TraesCS5A01G240200.3	Wheat	mitochondrion	19.68	27.6

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	GO:A0A078GZC9	UniProt:A0A078GZC9	EnsemblPlants:CDY29963
ProteinID:CDY29963	ProteinID:CDY29963.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192
GO:GO:0061025	EnsemblPlantsGene:GSBRNA2T00044480001	InterPro:IPR000727	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914
PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF144	SMART:SM00397	SMART:SM00503	InterPro:SNARE
SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI0004EC89EC
SEG:seg	:	:	:	:	:

Description

BnaC01g40450DBnaC01g40450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZC9]

Coordinates

chrLK032247:+:100772..103077

Molecular Weight (calculated)

35025.2 Da

IEP (calculated)

9.060

GRAVY (calculated)

-0.593

Length

310 amino acids

Sequence
(BLAST)

001: MNDLLKGSSE FSRDRSNRSD IESAHGPGNS GDLGLAGFFK KVGEIDNQYE KLDKHLKKLQ AAHEETKAVT KGPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RSKPGCGKGT GVDRTRTATT IAIKKKFKDK ISEFQTLRQN IHQEYREVVE RRVFTVTGQR ADEEMVDRLI ETGDSEQIFQ KAIMEQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKALKK QKSSRKWMCI AILILLIIII ITVVSVIKPW
301: TQKHGAHGGA

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.