Factsheet for TraesCS5D01G109500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G096800.1	Wheat	cytosol	98.04	98.04
TraesCS5B01G102700.1	Wheat	cytosol	96.73	96.73
HORVU5Hr1G026120.1	Barley	cytosol	92.81	92.81
Os06t0168500-01	Rice	plasma membrane	83.66	83.93
EES16084	Sorghum	cytosol	79.74	79.48
Zm00001d041716_P002	Maize	cytosol	80.39	77.6
Solyc01g056810.2.1	Tomato	cytosol	55.88	67.59
Bra005968.1-P	Field mustard	cytosol	62.75	63.16
Bra009318.1-P	Field mustard	cytosol	62.42	63.04
CDY21160	Canola	cytosol	27.12	62.41
Bra028672.1-P	Field mustard	cytosol	61.76	62.38
CDY51747	Canola	cytosol	27.45	62.22
KRH08507	Soybean	cytosol	62.42	62.01
CDY50666	Canola	cytosol	27.12	61.48
VIT_08s0032g00440.t01	Wine grape	cytosol	61.44	61.24
PGSC0003DMT400072284	Potato	cytosol	61.76	60.97
Solyc10g081580.1.1	Tomato	cytosol, plastid	61.44	60.65
AT5G08080.3	Thale cress	cytosol	61.76	60.0
TraesCS2D01G224100.1	Wheat	cytosol	58.82	59.41
GSMUA_Achr2P17410_001	Banana	cytosol	57.19	59.32
AT3G03800.1	Thale cress	cytosol	58.5	58.5
TraesCS2D01G248900.1	Wheat	cytosol	57.19	57.95
KRH70169	Soybean	cytosol	27.45	57.14
CDY29963	Canola	cytosol	57.19	56.45
Bra031972.1-P	Field mustard	cytosol	50.33	55.0
GSMUA_Achr7P16680_001	Banana	plasma membrane	66.01	54.01
Bra036431.1-P	Field mustard	cytosol	49.02	53.96
CDY51748	Canola	cytosol	30.72	53.11
CDY50665	Canola	cytosol	29.41	51.72
CDY21161	Canola	cytosol	30.07	51.4
TraesCS6D01G169800.1	Wheat	cytosol	43.79	43.93
TraesCS7D01G354500.1	Wheat	cytosol	42.48	42.48
TraesCS4D01G066100.1	Wheat	cytosol	34.64	33.54
TraesCS2D01G219400.1	Wheat	cytosol	28.76	25.36
TraesCS6D01G136400.1	Wheat	cytosol	22.22	22.22

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005484
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016192	InterPro:IPR000727	PFAM:PF00804
PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF153	SMART:SM00397
SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N	TMHMM:TMhelix
InterPro:T_SNARE_dom	EnsemblPlantsGene:TraesCS5D01G109500	EnsemblPlants:TraesCS5D01G109500.1	TIGR:cd00179	TIGR:cd15848	SEG:seg

Description

No Description!

Coordinates

chr5D:-:123496523..123499581

Molecular Weight (calculated)

35118.5 Da

IEP (calculated)

6.827

GRAVY (calculated)

-0.446

Length

306 amino acids

Sequence
(BLAST)

001: MRNLLSNSFE LNKEERPPGN VDIELGLQGD LSGSAQPGFD GFYEQVREID KLLETLTKLL KDLQNSNEES KIVTKASAMK DIKRRMEKDV NEVTKVARLT
101: KSKLQQLNKE NLANREKPVF HKGSSVDRSR TSVTITLTMR LRERISEFQT LREAIQTEYR EVVERRVFTV TGERADEETI DKLIETGDSE QIFQRAIQEQ
201: GRGRVLDTLQ EIQERHDMVK EIETKLLELQ QIFLDLSVLV EAQGEILNNI EVQVTGAVEH VQTGTNLLQK ARVLQKNTRK WTCIAIIILL IIVLVIVLSL
301: KPWAKK

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.