Factsheet for Zm00001d041716_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16084	Sorghum	cytosol	92.11	95.11
Os06t0168500-01	Rice	plasma membrane	83.28	86.56
TraesCS5A01G096800.1	Wheat	cytosol	78.55	81.37
TraesCS5B01G102700.1	Wheat	cytosol	78.23	81.05
TraesCS5D01G109500.1	Wheat	cytosol	77.6	80.39
HORVU5Hr1G026120.1	Barley	cytosol	77.6	80.39
Solyc01g056810.2.1	Tomato	cytosol	53.63	67.19
VIT_08s0032g00440.t01	Wine grape	cytosol	63.09	65.15
Bra005968.1-P	Field mustard	cytosol	60.88	63.49
KRH08507	Soybean	cytosol	61.51	63.31
CDY21160	Canola	cytosol	26.5	63.16
Bra009318.1-P	Field mustard	cytosol	59.94	62.71
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	59.94	62.5
Solyc10g081580.1.1	Tomato	cytosol, plastid	60.88	62.26
GSMUA_Achr2P17410_001	Banana	cytosol	57.73	62.03
PGSC0003DMT400072284	Potato	cytosol	60.57	61.94
Bra028672.1-P	Field mustard	cytosol	58.99	61.72
CDY51747	Canola	cytosol	26.18	61.48
CDY50666	Canola	cytosol	26.18	61.48
AT5G08080.3	Thale cress	cytosol	60.88	61.27
AT3G03800.1	Thale cress	cytosol	57.41	59.48
CDY29963	Canola	cytosol	55.84	57.1
KRH70169	Soybean	cytosol	26.18	56.46
Bra031972.1-P	Field mustard	cytosol	48.9	55.36
GSMUA_Achr7P16680_001	Banana	plasma membrane	64.67	54.81
Bra036431.1-P	Field mustard	cytosol	47.63	54.32
CDY50665	Canola	cytosol	29.65	54.02
CDY51748	Canola	cytosol	29.97	53.67
CDY21161	Canola	cytosol	29.65	52.51
Zm00001d018867_P002	Maize	plastid	58.68	47.57
Zm00001d021664_P001	Maize	cytosol	51.1	45.51
Zm00001d034365_P001	Maize	plasma membrane	41.96	43.46
Zm00001d046482_P001	Maize	cytosol	40.06	41.1
Zm00001d036931_P001	Maize	cytosol	39.75	40.78
Zm00001d053607_P001	Maize	cytosol	38.17	38.66
Zm00001d013323_P001	Maize	cytosol	36.59	36.94
Zm00001d033919_P001	Maize	plasma membrane	35.96	36.42
Zm00001d013114_P001	Maize	cytosol, plastid	30.28	32.88
Zm00001d013115_P001	Maize	cytosol	12.93	28.08
Zm00001d035331_P001	Maize	cytosol	22.71	24.16

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	EntrezGene:100384255	MapMan:22.7.1.1	UniProt:A0A1D6MXV0	ncoils:Coil
GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	InterPro:IPR000727	ProteinID:ONM33550.1
PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF153
SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N
TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI000843FAA5	EnsemblPlantsGene:Zm00001d041716	EnsemblPlants:Zm00001d041716_P002	EnsemblPlants:Zm00001d041716_T002
SEG:seg	:	:	:	:	:

Description

Syntaxin-132

Coordinates

chr3:+:134765884..134771067

Molecular Weight (calculated)

35940.3 Da

IEP (calculated)

7.423

GRAVY (calculated)

-0.524

Length

317 amino acids

Sequence
(BLAST)

001: MRNLLTDSFE LGKRGQSSGN VDIELGLQGD LTSSAQPGFE GFYEQVKEVE SLLNTLTKLL KDLQPTSKDC QFTQNSNEES KVVTKASAMK EVKKRMEKDV
101: NEVTKIARLA KSKVEQLNKD NAVNRGKPGF GKGSGVDRSR TTTTVALTKK LRERILEFQT LREEIQQEYR DVVERRVFTV TGERADEETI DKLIETGDGE
201: QIFQRAIQEQ GRGRVLDTLQ EIQERHDTVK EIERKLLDLQ QIFLDLAVLV EAQGEMLDNI ETQVTGAAEH IQTGTNLLQK AKKLQKNTRK WTCIGIIILL
301: IIILIIILSL KPWSWGK

Best Arabidopsis Sequence Match ( AT5G08080.3 )
(BLAST)

001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQI YDSVASQLPC ASHEESKSVT KAPAMKAIKK TMEKDVDEVG
101: SIARFIKGKL EELDRENLAN RQKPGCAKGS GVDRSRTATT LSLKKKLKDK MAEFQVLREN IQQEYRDVVD RRVYTVTGER ADEDTIDELI ETGNSEQIFQ
201: KAIQEQGRGQ VMDTLAEIQE RHDAVRDLEK KLLDLQQIFL DMAVLVDAQG EMLDNIESQV SSAVDHVQSG NTALQRAKSL QKNSRKWMCI AIIILLIVVA
301: VIVVGVLKPW KNKSA

Arabidopsis Description

SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.