Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97312 | Sorghum | cytosol | 73.88 | 86.23 |
| TraesCS2B01G244700.1 | Wheat | cytosol | 66.29 | 77.89 |
| TraesCS2D01G224100.1 | Wheat | cytosol | 66.01 | 77.56 |
| TraesCS2A01G219200.1 | Wheat | cytosol | 65.73 | 77.23 |
| HORVU2Hr1G045350.3 | Barley | cytosol | 63.48 | 77.13 |
| Os07t0528900-00 | Rice | cytosol, extracellular, plasma membrane | 23.03 | 73.87 |
| VIT_12s0059g02340.t01 | Wine grape | cytosol | 51.69 | 60.53 |
| KRH22542 | Soybean | endoplasmic reticulum, extracellular, mitochondrion | 50.28 | 58.5 |
| KRH26811 | Soybean | cytosol | 50.0 | 58.17 |
| Solyc07g052470.2.1 | Tomato | cytosol | 49.44 | 57.7 |
| GSMUA_Achr9P24850_001 | Banana | cytosol | 44.94 | 57.14 |
| Zm00001d007902_P001 | Maize | mitochondrion, plasma membrane | 47.75 | 55.92 |
| PGSC0003DMT400065519 | Potato | cytosol | 47.75 | 54.49 |
| Zm00001d041716_P002 | Maize | cytosol | 45.51 | 51.1 |
| Zm00001d018867_P002 | Maize | plastid | 48.31 | 43.99 |
| Zm00001d034365_P001 | Maize | plasma membrane | 34.83 | 40.52 |
| Zm00001d046482_P001 | Maize | cytosol | 35.11 | 40.45 |
| Zm00001d036931_P001 | Maize | cytosol | 34.83 | 40.13 |
| Zm00001d053607_P001 | Maize | cytosol | 33.99 | 38.66 |
| Zm00001d033919_P001 | Maize | plasma membrane | 31.74 | 36.1 |
| Zm00001d013323_P001 | Maize | cytosol | 31.46 | 35.67 |
| TraesCS2B01G238200.2 | Wheat | cytosol | 28.93 | 33.44 |
| HORVU2Hr1G043130.15 | Barley | cytosol | 29.49 | 33.44 |
| Zm00001d013114_P001 | Maize | cytosol, plastid | 26.12 | 31.85 |
| Zm00001d013115_P001 | Maize | cytosol | 12.64 | 30.82 |
| TraesCS2D01G219400.1 | Wheat | cytosol | 29.49 | 30.26 |
| TraesCS2A01G213400.1 | Wheat | cytosol | 22.75 | 30.22 |
| Zm00001d035331_P001 | Maize | cytosol | 22.47 | 26.85 |
Protein Annotations
| Gene3D:1.20.58.70 | MapMan:22.7.1.1 | UniProt:A0A1R3QVV0 | ncoils:Coil | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:IPR000727 | ProteinID:ONM57946.1 |
| PFAM:PF00804 | PFAM:PF05739 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 | SMART:SM00397 |
| SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom |
| UniParc:UPI00097E40A8 | EnsemblPlantsGene:Zm00001d021664 | EnsemblPlants:Zm00001d021664_P001 | EnsemblPlants:Zm00001d021664_T001 | SEG:seg | : |
Description
Syntaxin-132
Coordinates
chr7:+:159487234..159489965
Molecular Weight (calculated)
40925.2 Da
IEP (calculated)
6.142
GRAVY (calculated)
-0.481
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNLLSDSFE RDEKPESERD IEMGNRNPKD NSDYGLKDFF EQVKEIEVLL DKMSNIVHKL QEANEESKSV TKASAMKVIK ERMEKDIDGV LKIARNVKVK
101: LEQMDRNVWT LSLTMSSACD SLHPMLARAH YSPLRFAESR EQTEAGVWEG HQRRPIKDVH DHVRSSCIYY ANAKVIQQNV NFDCSALKKK LKERMNDFQN
201: LRQTIQEEYR EVVERRIFTV TGTKPSEEVI DRLIETGSSE QIFERAIQGT GRGQILDTVE EIQERHDAVM EIEKRLLELQ MIFADMAALV DAQREDLDNI
301: ENLVQNAVNH VVSGTEALRT AKSLQKKSRK CMLIAIIILL VIAAIVVLSI LKPWAK
101: LEQMDRNVWT LSLTMSSACD SLHPMLARAH YSPLRFAESR EQTEAGVWEG HQRRPIKDVH DHVRSSCIYY ANAKVIQQNV NFDCSALKKK LKERMNDFQN
201: LRQTIQEEYR EVVERRIFTV TGTKPSEEVI DRLIETGSSE QIFERAIQGT GRGQILDTVE EIQERHDAVM EIEKRLLELQ MIFADMAALV DAQREDLDNI
301: ENLVQNAVNH VVSGTEALRT AKSLQKKSRK CMLIAIIILL VIAAIVVLSI LKPWAK
001: MNDLFSNSFK KNQAQLGDVE AGQETMNLDK FFEDVENVKD DMKGVEALYK KLQDSNEECK TVHNAKKVKE LRAKMDGDVA MVLKRVKIIK QKLEALEKAN
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGQILDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGQILDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK
Arabidopsis Description
SYP125Syntaxin-125 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXB0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.