Factsheet for TraesCS2B01G238200.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G213400.1	Wheat	cytosol	71.1	81.72
TraesCS2D01G219400.1	Wheat	cytosol	90.26	80.12
HORVU2Hr1G043130.15	Barley	cytosol	74.03	72.61
EER97312	Sorghum	cytosol	35.06	35.41
TraesCS2B01G244700.1	Wheat	cytosol	33.12	33.66
GSMUA_Achr9P24850_001	Banana	cytosol	28.57	31.43
TraesCS7B01G394300.1	Wheat	cytosol	28.57	28.95
Zm00001d021664_P001	Maize	cytosol	33.44	28.93
VIT_12s0059g02340.t01	Wine grape	cytosol	28.25	28.62
TraesCS2B01G263700.1	Wheat	cytosol	27.92	28.48
TraesCS5B01G102700.1	Wheat	cytosol	27.92	28.1
KRH26811	Soybean	cytosol	27.27	27.45
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	27.27	27.45
TraesCS5B01G034800.1	Wheat	cytosol	26.95	27.39
TraesCS5B01G035600.1	Wheat	cytosol	25.97	25.89
Solyc07g052470.2.1	Tomato	cytosol	25.32	25.57
PGSC0003DMT400065519	Potato	cytosol	25.32	25.0
Os07t0528900-00	Rice	cytosol, extracellular, plasma membrane	8.77	24.32
TraesCS4B01G067100.1	Wheat	cytosol	12.66	23.93
TraesCS6B01G211000.1	Wheat	cytosol	23.05	23.28
TraesCS7B01G260100.1	Wheat	cytosol	22.73	22.88
TraesCS5B01G427600.1	Wheat	cytosol, golgi, nucleus	22.73	21.88
TraesCS4B01G067200.1	Wheat	cytosol	21.75	21.34
TraesCS6B01G175300.1	Wheat	cytosol	13.31	13.4

Protein Annotations

EnsemblPlants:TraesCS2B01G238200.2	EnsemblPlantsGene:TraesCS2B01G238200	Gene3D:1.20.58.70	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016192	InterPro:SNARE	InterPro:Syntaxin_N	ncoils:Coil	PANTHER:PTHR19957
PANTHER:PTHR19957:SF153	PFAM:PF00804	SEG:seg	SUPFAM:SSF47661	TMHMM:TMhelix	MapMan:22.7.1.1

Description

No Description!

Coordinates

chr2B:+:239507161..239509136

Molecular Weight (calculated)

34173.4 Da

IEP (calculated)

10.374

GRAVY (calculated)

-0.134

Length

308 amino acids

Sequence
(BLAST)

001: MSDLPPAPAM GGERDIELGL PTTNTTSGYT LQHILEDIRQ FSTLLGSTPK MLHKLKEANK ELKSAAESAA VKEIKGRMEK DMDEAVKMAR IMKEKLSRIF
101: QGVLVPVLNN MSTGHAYPGL TVPVTLDPST LSMITALKIK LKERKKDLKN LGKAMQEEYI EVVQSRIFTV TGVKLSDKVI RVIDTNSITQ MFEHRVHGIG
201: PEQAGAIGEE IKERRGAAMD LGKKAVEVRK NFREMLALVK AQEKIVKALS QVRQSAAVRA RSIAEELARA RSRAEELRQK MEETKLLIVL FVIFLLLFIV
301: AVTLGISG

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.