Factsheet for TraesCS2D01G219400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G238200.2	Wheat	cytosol	80.12	90.26
TraesCS2A01G213400.1	Wheat	cytosol	64.55	83.58
HORVU2Hr1G043130.15	Barley	cytosol	65.42	72.29
EER97312	Sorghum	cytosol	31.41	35.74
TraesCS2D01G224100.1	Wheat	cytosol	29.97	34.32
GSMUA_Achr9P24850_001	Banana	cytosol	25.65	31.79
Zm00001d021664_P001	Maize	cytosol	30.26	29.49
TraesCS2D01G248900.1	Wheat	cytosol	25.65	29.47
TraesCS5D01G109500.1	Wheat	cytosol	25.36	28.76
VIT_12s0059g02340.t01	Wine grape	cytosol	25.07	28.62
KRH26811	Soybean	cytosol	23.63	26.8
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	23.63	26.8
Solyc07g052470.2.1	Tomato	cytosol	22.48	25.57
PGSC0003DMT400065519	Potato	cytosol	22.77	25.32
Os07t0528900-00	Rice	cytosol, extracellular, plasma membrane	7.78	24.32
TraesCS6D01G169800.1	Wheat	cytosol	21.04	23.93
TraesCS7D01G354500.1	Wheat	cytosol	20.46	23.2
TraesCS4D01G066100.1	Wheat	cytosol	19.6	21.52
TraesCS6D01G136400.1	Wheat	cytosol	12.1	13.73

Protein Annotations

EnsemblPlants:TraesCS2D01G219400.1	EnsemblPlantsGene:TraesCS2D01G219400	Gene3D:1.20.58.70	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016192	InterPro:SNARE	InterPro:Syntaxin_N	ncoils:Coil	PANTHER:PTHR19957
PANTHER:PTHR19957:SF153	PFAM:PF00804	SEG:seg	SUPFAM:SSF47661	TMHMM:TMhelix	MapMan:22.7.1.1

Description

No Description!

Coordinates

chr2D:+:186313076..186315689

Molecular Weight (calculated)

38548.5 Da

IEP (calculated)

7.734

GRAVY (calculated)

-0.051

Length

347 amino acids

Sequence
(BLAST)

001: MSDLPPAAAM GGERDIELGL PTTNTTSGYT LQHILEDIRQ FSTLLGSTPT MLHKLEVRET LMPILCSPGH NVFVFHEKIG LFPRTYFAQF ALLSPHLQEA
101: NKELKSAAES AAVKEIKGRM EKDMDEAVKM ARIMKEKLIR IFQGVLVPVL NNMSTGHAYP GLTVPMTLDP STLSIITALK IKLKERKKDL ENLGKAMQEE
201: YIEVVQSRIF TVTGVKLSDE VIRVIDTSSI MQMFEHRVHG IGPEQASAIG EEIKERRAAA MDLGKKNAEV QKNFREMLAL VKAQEKIVKA LSQSAEARAR
301: SAAEELARAR SRVQELREEM EETKLLIALV VILFLLCIVA VTLGISG

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.