Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G238200.2 | Wheat | cytosol | 72.61 | 74.03 |
| TraesCS2D01G219400.1 | Wheat | cytosol | 72.29 | 65.42 |
| TraesCS2A01G213400.1 | Wheat | cytosol | 54.78 | 64.18 |
| EER97312 | Sorghum | cytosol | 35.67 | 36.72 |
| HORVU2Hr1G045350.3 | Barley | cytosol | 32.8 | 35.15 |
| HORVU6Hr1G095330.1 | Barley | cytosol | 31.21 | 32.56 |
| GSMUA_Achr9P24850_001 | Banana | cytosol | 27.39 | 30.71 |
| HORVU2Hr1G057350.2 | Barley | cytosol | 31.21 | 29.79 |
| Os07t0528900-00 | Rice | cytosol, extracellular, plasma membrane | 10.51 | 29.73 |
| Zm00001d021664_P001 | Maize | cytosol | 33.44 | 29.49 |
| KRH22542 | Soybean | endoplasmic reticulum, extracellular, mitochondrion | 28.34 | 29.09 |
| KRH26811 | Soybean | cytosol | 28.34 | 29.09 |
| VIT_12s0059g02340.t01 | Wine grape | cytosol | 28.03 | 28.95 |
| HORVU5Hr1G026120.1 | Barley | cytosol | 28.03 | 28.76 |
| Solyc07g052470.2.1 | Tomato | cytosol | 26.11 | 26.89 |
| PGSC0003DMT400065519 | Potato | cytosol | 25.8 | 25.96 |
| HORVU5Hr1G103590.1 | Barley | cytosol, mitochondrion | 16.24 | 20.0 |
| HORVU4Hr1G011180.2 | Barley | cytosol | 22.61 | 19.56 |
| HORVU7Hr1G085550.1 | Barley | cytosol | 13.69 | 13.65 |
| HORVU6Hr1G028850.1 | Barley | cytosol | 13.06 | 13.4 |
| HORVU6Hr1G038490.4 | Barley | nucleus | 13.06 | 13.02 |
| HORVU5Hr1G103620.1 | Barley | cytosol | 6.37 | 12.9 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G043130.15 | EnsemblPlantsGene:HORVU2Hr1G043130 | Gene3D:1.20.58.70 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:SNARE | InterPro:Syntaxin_N | ncoils:Coil |
| PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 | PFAM:PF00804 | SEG:seg | SUPFAM:SSF47661 | TMHMM:TMhelix |
| UniParc:UPI000B47A30B | UniProt:A0A287HU88 | MapMan:22.7.1.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:219216484..219218670
Molecular Weight (calculated)
35121.4 Da
IEP (calculated)
9.988
GRAVY (calculated)
-0.228
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: CSMSNLPTAM GGERDIELGL PNTNTTAAYT LHHLLQDTRQ FATMLDSTAK MLHKLKEANK ELKSAAESAA VKQIKGRMEK DMDEVGNMAR IMKEKLNRIF
101: QGVLIPVLNN MSTGHAYPGL ISLMIMDPAT LSKFTAVKIK LKERKKDLEN LGKSIQEEYL KVVQSRIFTV TGVRLSDEVL RVIDTNSIVQ MFENRVHGIG
201: PEQQVGAVGE EIKERRDAAM DLGKKTVELQ KNFREMLGLV KAQEKMVKAM HQQVQNAVIR ARSTAKEQRL RAEMARAQSS AEELRDEVAK NKLLTELVVI
301: GLLLLLCIIV INLA
101: QGVLIPVLNN MSTGHAYPGL ISLMIMDPAT LSKFTAVKIK LKERKKDLEN LGKSIQEEYL KVVQSRIFTV TGVRLSDEVL RVIDTNSIVQ MFENRVHGIG
201: PEQQVGAVGE EIKERRDAAM DLGKKTVELQ KNFREMLGLV KAQEKMVKAM HQQVQNAVIR ARSTAKEQRL RAEMARAQSS AEELRDEVAK NKLLTELVVI
301: GLLLLLCIIV INLA
001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
Arabidopsis Description
SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.