Factsheet for HORVU6Hr1G095330.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G394300.1	Wheat	cytosol	94.02	93.09
TraesCS7A01G481800.1	Wheat	cytosol	93.36	92.43
EER98026	Sorghum	cytosol	85.71	85.15
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	85.38	84.54
HORVU2Hr1G057350.2	Barley	cytosol	87.71	80.24
Solyc01g056810.2.1	Tomato	cytosol	58.14	69.17
Zm00001d018867_P002	Maize	plastid	85.71	65.98
Bra005968.1-P	Field mustard	cytosol	65.45	64.8
Bra009318.1-P	Field mustard	cytosol	65.12	64.69
KRH08507	Soybean	cytosol	65.45	63.96
Bra028672.1-P	Field mustard	cytosol	64.12	63.7
Solyc10g081580.1.1	Tomato	cytosol, plastid	65.45	63.55
PGSC0003DMT400072284	Potato	cytosol	65.12	63.23
VIT_08s0032g00440.t01	Wine grape	cytosol	64.12	62.87
GSMUA_Achr2P01540_001	Banana	cytosol	61.13	61.74
CDY21160	Canola	cytosol	27.24	61.65
AT5G08080.3	Thale cress	cytosol	64.45	61.59
CDY51747	Canola	cytosol	26.91	60.0
CDY50666	Canola	cytosol	26.58	59.26
HORVU2Hr1G045350.3	Barley	cytosol	56.15	57.68
AT3G03800.1	Thale cress	cytosol	58.47	57.52
HORVU5Hr1G026120.1	Barley	cytosol	58.47	57.52
CDY29963	Canola	cytosol	57.81	56.13
Bra031972.1-P	Field mustard	cytosol	51.49	55.36
KRH70169	Soybean	cytosol	26.91	55.1
Bra036431.1-P	Field mustard	cytosol	50.83	55.04
CDY51748	Canola	cytosol	31.89	54.24
CDY50665	Canola	cytosol	30.9	53.45
CDY21161	Canola	cytosol	31.23	52.51
HORVU5Hr1G103590.1	Barley	cytosol, mitochondrion	33.89	40.0
HORVU2Hr1G043130.15	Barley	cytosol	32.56	31.21
HORVU4Hr1G011180.2	Barley	cytosol	36.88	30.58
HORVU6Hr1G028850.1	Barley	cytosol	24.92	24.51
HORVU7Hr1G085550.1	Barley	cytosol	23.26	22.22
HORVU6Hr1G038490.4	Barley	nucleus	21.26	20.32
HORVU5Hr1G103620.1	Barley	cytosol	9.97	19.35

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	UniProt:A0A287VAE8	ncoils:Coil	GO:GO:0003674
GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	EnsemblPlantsGene:HORVU6Hr1G095330	EnsemblPlants:HORVU6Hr1G095330.1	InterPro:IPR000727
PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF153
SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N
TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI000B4845A8	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:583314828..583318238

Molecular Weight (calculated)

34253.3 Da

IEP (calculated)

8.684

GRAVY (calculated)

-0.561

Length

301 amino acids

Sequence
(BLAST)

001: MNNLLTDSFE LPRRDSSTDL EMGMHHPDAS HNLQAFLNKV DGIDSLIAKL ATLFTKLQSA NEESKAVTKA SAMKEIKQRM EKDIDEVGKV ARLAKTKLDQ
101: LEKDNLSNRQ KPGCDKDSAV DRSREQTTGA VKKKLKKRMD DFQVLRESIR QEYRQVVERR VFTVTGNRPD EETIDDLIET GRSEQIFKDA VQQQGRGQIL
201: DTVAEIQERH DAVRDLERKL LELQQIFLDM AVLVEAQGDM INHIETHVSN ATNHIQQGVG ALQKAKTLQK NSRKWMCYAI ILLLVVVAIV VLGVIQPWKK
301: K

Best Arabidopsis Sequence Match ( AT5G08080.1 )
(BLAST)

001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA

Arabidopsis Description

SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.