Factsheet for HORVU2Hr1G045350.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G244700.1	Wheat	cytosol	97.95	94.72
TraesCS2D01G224100.1	Wheat	cytosol	97.27	94.06
TraesCS2A01G219200.1	Wheat	cytosol	96.93	93.73
EER97312	Sorghum	cytosol	85.67	82.3
Os07t0528900-00	Rice	cytosol, extracellular, plasma membrane	27.65	72.97
VIT_12s0059g02340.t01	Wine grape	cytosol	67.24	64.8
GSMUA_Achr9P24850_001	Banana	cytosol	61.09	63.93
Zm00001d021664_P001	Maize	cytosol	77.13	63.48
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	65.19	62.42
KRH26811	Soybean	cytosol	64.51	61.76
Solyc07g052470.2.1	Tomato	cytosol	64.16	61.64
HORVU5Hr1G026120.1	Barley	cytosol	60.41	57.84
PGSC0003DMT400065519	Potato	cytosol	61.43	57.69
HORVU6Hr1G095330.1	Barley	cytosol	57.68	56.15
HORVU2Hr1G057350.2	Barley	cytosol	57.34	51.06
HORVU5Hr1G103590.1	Barley	cytosol, mitochondrion	33.45	38.43
HORVU2Hr1G043130.15	Barley	cytosol	35.15	32.8
HORVU4Hr1G011180.2	Barley	cytosol	39.59	31.96
HORVU6Hr1G028850.1	Barley	cytosol	24.23	23.2
HORVU7Hr1G085550.1	Barley	cytosol	21.5	20.0
HORVU6Hr1G038490.4	Barley	nucleus	19.8	18.41
HORVU5Hr1G103620.1	Barley	cytosol	8.53	16.13

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	UniProt:A0A287HVX0	ncoils:Coil	GO:GO:0003674
GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	EnsemblPlantsGene:HORVU2Hr1G045350	EnsemblPlants:HORVU2Hr1G045350.3	InterPro:IPR000727
PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF153
SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N
TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI000B461729	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr2H:-:237319935..237322382

Molecular Weight (calculated)

33288.6 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.495

Length

293 amino acids

Sequence
(BLAST)

001: MDENPPKERD IEMGRQNSKN KSDYGLEDFF KEVKEIEMLL DKMSNIVQKL QEANEKSKSV TKASAMKAIK GHMEKDIDEV GKIARSIKVK LEQMDRNNLA
101: NRKKPGCGKG TSVDRSRMSM TIALKKRLKE RMNDFQNLRQ TIQQEYREVV ERRIFTVTGT KPSDEVIDNL IETGSSEQIF EKAIQGIGRG QIMATVEEIQ
201: ERHDVVVDIE KKLLELQQIF ADMAALVDAQ GEILDNIESQ VQNAVNHVQT GTEALRSAKS LQKKSRKCMM IAIIMLLIIA VIVVLSVLKP WAK

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.