Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G263700.1 Wheat cytosol 87.23 95.03
TraesCS2D01G248900.1 Wheat cytosol 87.23 95.03
EER98026 Sorghum cytosol 81.76 88.78
Zm00001d007902_P001 Maize mitochondrion, plasma membrane 81.76 88.49
HORVU6Hr1G095330.1 Barley cytosol 80.24 87.71
TraesCS2A01G246600.1 Wheat cytosol 86.63 85.59
Zm00001d018867_P002 Maize plastid 83.59 70.33
Solyc01g056810.2.1 Tomato cytosol 51.98 67.59
Solyc10g081580.1.1 Tomato cytosol, plastid 61.4 65.16
Bra005968.1-P Field mustard cytosol 60.18 65.13
Bra009318.1-P Field mustard cytosol 59.88 65.02
PGSC0003DMT400072284 Potato cytosol 61.09 64.84
VIT_08s0032g00440.t01 Wine grape cytosol 60.49 64.82
Bra028672.1-P Field mustard cytosol 58.97 64.03
KRH08507 Soybean cytosol 59.27 63.31
GSMUA_Achr2P01540_001 Banana cytosol 57.14 63.09
AT5G08080.3 Thale cress cytosol 58.97 61.59
KRH70169 Soybean cytosol 27.05 60.54
AT3G03800.1 Thale cress cytosol 55.02 59.15
CDY21160 Canola cytosol 23.4 57.89
CDY51748 Canola cytosol 31.0 57.63
CDY50665 Canola cytosol 30.4 57.47
HORVU2Hr1G045350.3 Barley cytosol 51.06 57.34
CDY29963 Canola cytosol 53.5 56.77
HORVU5Hr1G026120.1 Barley cytosol 52.58 56.54
CDY21161 Canola cytosol 30.7 56.42
CDY51747 Canola cytosol 22.8 55.56
Bra036431.1-P Field mustard cytosol 46.81 55.4
Bra031972.1-P Field mustard cytosol 47.11 55.36
CDY50666 Canola cytosol 22.49 54.81
HORVU5Hr1G103590.1 Barley cytosol, mitochondrion 31.31 40.39
HORVU2Hr1G043130.15 Barley cytosol 29.79 31.21
HORVU4Hr1G011180.2 Barley cytosol 33.74 30.58
HORVU6Hr1G028850.1 Barley cytosol 22.19 23.86
HORVU7Hr1G085550.1 Barley cytosol 21.88 22.86
HORVU5Hr1G103620.1 Barley cytosol 10.03 21.29
HORVU6Hr1G038490.4 Barley nucleus 20.36 21.27
Protein Annotations
Gene3D:1.20.5.110Gene3D:1.20.58.70MapMan:22.7.1.1ncoils:CoilGO:GO:0003674GO:GO:0005484
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006810
GO:GO:0006886GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0016192
GO:GO:0061025EnsemblPlantsGene:HORVU2Hr1G057350EnsemblPlants:HORVU2Hr1G057350.2InterPro:IPR000727PFAM:PF00804PFAM:PF05739
ScanProsite:PS00914PFscan:PS50192PANTHER:PTHR19957PANTHER:PTHR19957:SF153SMART:SM00397SMART:SM00503
InterPro:SNARESUPFAM:SSF47661InterPro:Syntaxin/epimorphin_CSInterPro:Syntaxin_NTMHMM:TMhelixInterPro:T_SNARE_dom
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:366954694..367024409
Molecular Weight (calculated)
37196.8 Da
IEP (calculated)
9.115
GRAVY (calculated)
-0.561
Length
329 amino acids
Sequence
(BLAST)
001: PLSLSSPRHA CGSAAMNNLL TDSFELPRRD SSRDGDVEMG MHQPDASDNL KGFLKKVDGI ESLIAKLTNL LTKLQSANEE SKAVTKASAM KAIKQRMEKD
101: IDEVGKIARM AKTKVDELEK DNLSNRQKPG CGKGSAVDRS REQTTGAVKK KLKERMDDFQ VLRESIRQEY REVVERRVFT VTGNRPDEET IDDLIETGRS
201: EQIFKDAVQQ QGRGQVLDTV AEIQERHDAV RDLERKLLEL QQIFLDMAVL VEAQGDMINH IETHVSNATN HIQQGVGALQ NAKKLQKNSR KWMCYAIILL
301: LVVLKSYFFH GWITATTMIT TITRRRMMA
Best Arabidopsis Sequence Match ( AT5G08080.1 )
(BLAST)
001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA
Arabidopsis Description
SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.