Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 1
- cytosol 2
- golgi 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51747 | Canola | cytosol | 40.71 | 76.3 |
| CDY21160 | Canola | cytosol | 39.92 | 75.94 |
| CDY50666 | Canola | cytosol | 39.92 | 74.81 |
| Solyc10g081580.1.1 | Tomato | cytosol, plastid | 88.93 | 72.58 |
| VIT_08s0032g00440.t01 | Wine grape | cytosol | 84.58 | 69.71 |
| KRH08507 | Soybean | cytosol | 83.0 | 68.18 |
| Bra005968.1-P | Field mustard | cytosol | 81.82 | 68.09 |
| Bra009318.1-P | Field mustard | cytosol | 81.03 | 67.66 |
| Bra028672.1-P | Field mustard | cytosol | 79.84 | 66.67 |
| GSMUA_Achr2P17410_001 | Banana | cytosol | 76.28 | 65.42 |
| AT5G08080.3 | Thale cress | cytosol | 80.63 | 64.76 |
| CDY29963 | Canola | cytosol | 75.49 | 61.61 |
| Zm00001d007902_P001 | Maize | mitochondrion, plasma membrane | 71.94 | 59.87 |
| EER98026 | Sorghum | cytosol | 71.15 | 59.41 |
| GSMUA_Achr2P01540_001 | Banana | cytosol | 69.57 | 59.06 |
| TraesCS2D01G248900.1 | Wheat | cytosol | 70.36 | 58.94 |
| TraesCS2B01G263700.1 | Wheat | cytosol | 70.36 | 58.94 |
| KRH70169 | Soybean | cytosol | 33.99 | 58.5 |
| HORVU6Hr1G095330.1 | Barley | cytosol | 69.17 | 58.14 |
| TraesCS7B01G394300.1 | Wheat | cytosol | 68.77 | 57.24 |
| TraesCS7A01G481800.1 | Wheat | cytosol | 68.38 | 56.91 |
| HORVU5Hr1G026120.1 | Barley | cytosol | 68.77 | 56.86 |
| Os06t0168500-01 | Rice | plasma membrane | 67.98 | 56.39 |
| Solyc07g052470.2.1 | Tomato | cytosol | 67.59 | 56.07 |
| TraesCS5D01G109500.1 | Wheat | cytosol | 67.59 | 55.88 |
| TraesCS5B01G102700.1 | Wheat | cytosol | 67.59 | 55.88 |
| TraesCS5A01G096800.1 | Wheat | cytosol | 67.59 | 55.88 |
| TraesCS5B01G034800.1 | Wheat | cytosol | 66.01 | 55.12 |
| EES16084 | Sorghum | cytosol | 65.22 | 53.75 |
| Zm00001d041716_P002 | Maize | cytosol | 67.19 | 53.63 |
| TraesCS2A01G246600.1 | Wheat | cytosol | 70.36 | 53.45 |
| TraesCS5B01G035600.1 | Wheat | cytosol | 64.43 | 52.75 |
| HORVU2Hr1G057350.2 | Barley | cytosol | 67.59 | 51.98 |
| CDY51748 | Canola | cytosol | 35.97 | 51.41 |
| GSMUA_Achr7P16680_001 | Banana | plasma membrane | 75.89 | 51.34 |
| CDY50665 | Canola | cytosol | 34.39 | 50.0 |
| CDY21161 | Canola | cytosol | 35.18 | 49.72 |
| Zm00001d018867_P002 | Maize | plastid | 71.15 | 46.04 |
| Solyc01g006950.2.1 | Tomato | nucleus | 51.78 | 43.67 |
| Solyc10g081850.1.1 | Tomato | cytosol | 51.78 | 43.23 |
| Solyc12g005580.1.1 | Tomato | cytosol | 46.25 | 37.74 |
| Solyc06g053760.2.1 | Tomato | cytosol | 44.66 | 36.33 |
| TraesCS1A01G088800.1 | Wheat | cytosol | 35.18 | 31.01 |
| TraesCS5A01G240200.3 | Wheat | mitochondrion | 25.69 | 29.41 |
| Solyc02g085090.1.1 | Tomato | cytosol | 33.6 | 28.43 |
| Solyc01g109750.2.1 | Tomato | cytosol | 30.83 | 27.86 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.1 | ncoils:Coil | GO:GO:0000149 | GO:GO:0003674 |
| GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006887 | GO:GO:0006906 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0016192 | GO:GO:0031201 | GO:GO:0048278 | InterPro:IPR000727 | UniProt:K4AVP6 | PFAM:PF00804 |
| PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 | SMART:SM00397 |
| SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | EnsemblPlantsGene:Solyc01g056810.2 | EnsemblPlants:Solyc01g056810.2.1 | InterPro:Syntaxin/epimorphin_CS |
| InterPro:Syntaxin_N | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0002761921 | SEG:seg | : |
Description
No Description!
Coordinates
chr1:-:56745060..56755127
Molecular Weight (calculated)
28458.4 Da
IEP (calculated)
9.105
GRAVY (calculated)
-0.404
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MLALSLIDAH EESKAVTKAT AMKAIKQRME KDVDEVSKVA RFIKSKIEGL DKENLSNRSK PGCGKGSAVD RSRTATTVSL KKKLKDKMSE FQTLRENIHN
101: EYREVVERRV YTVTGNRADE ETIDRLIETG DSEQIFQKAI REQGRGQIMD TLAEIQERHD AVRELERKLL ELQQIFLDMA VLVDAQGDML DNIESQVSAA
201: VDHVQSGNTA LQKAKSLQRN SRKWMCIAII ILLIIVAVIV VGVLKPWNSN KGA
101: EYREVVERRV YTVTGNRADE ETIDRLIETG DSEQIFQKAI REQGRGQIMD TLAEIQERHD AVRELERKLL ELQQIFLDMA VLVDAQGDML DNIESQVSAA
201: VDHVQSGNTA LQKAKSLQRN SRKWMCIAII ILLIIVAVIV VGVLKPWNSN KGA
001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
Arabidopsis Description
SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.