Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G481800.1 | Wheat | cytosol | 97.04 | 97.04 |
| HORVU6Hr1G095330.1 | Barley | cytosol | 93.09 | 94.02 |
| TraesCS2B01G263700.1 | Wheat | cytosol | 91.78 | 92.38 |
| EER98026 | Sorghum | cytosol | 86.51 | 86.8 |
| Zm00001d007902_P001 | Maize | mitochondrion, plasma membrane | 86.18 | 86.18 |
| TraesCS5B01G034800.1 | Wheat | cytosol | 81.91 | 82.18 |
| TraesCS5B01G035600.1 | Wheat | cytosol | 81.58 | 80.26 |
| Solyc01g056810.2.1 | Tomato | cytosol | 57.24 | 68.77 |
| Bra005968.1-P | Field mustard | cytosol | 67.43 | 67.43 |
| Bra009318.1-P | Field mustard | cytosol | 67.11 | 67.33 |
| Zm00001d018867_P002 | Maize | plastid | 86.18 | 67.01 |
| Bra028672.1-P | Field mustard | cytosol | 65.79 | 66.01 |
| Solyc10g081580.1.1 | Tomato | cytosol, plastid | 66.78 | 65.48 |
| PGSC0003DMT400072284 | Potato | cytosol | 66.45 | 65.16 |
| KRH08507 | Soybean | cytosol | 65.79 | 64.94 |
| VIT_08s0032g00440.t01 | Wine grape | cytosol | 65.46 | 64.82 |
| AT5G08080.3 | Thale cress | cytosol | 66.12 | 63.81 |
| GSMUA_Achr2P01540_001 | Banana | cytosol | 61.51 | 62.75 |
| CDY21160 | Canola | cytosol | 26.64 | 60.9 |
| TraesCS2B01G244700.1 | Wheat | cytosol | 60.53 | 60.73 |
| CDY51747 | Canola | cytosol | 26.32 | 59.26 |
| CDY50666 | Canola | cytosol | 25.99 | 58.52 |
| KRH70169 | Soybean | cytosol | 28.29 | 58.5 |
| AT3G03800.1 | Thale cress | cytosol | 58.88 | 58.5 |
| TraesCS5B01G102700.1 | Wheat | cytosol | 57.57 | 57.19 |
| CDY29963 | Canola | cytosol | 58.22 | 57.1 |
| Bra036431.1-P | Field mustard | cytosol | 50.99 | 55.76 |
| CDY51748 | Canola | cytosol | 32.24 | 55.37 |
| Bra031972.1-P | Field mustard | cytosol | 50.99 | 55.36 |
| CDY21161 | Canola | cytosol | 32.24 | 54.75 |
| CDY50665 | Canola | cytosol | 31.25 | 54.6 |
| TraesCS4B01G067100.1 | Wheat | cytosol | 24.34 | 45.4 |
| TraesCS6B01G211000.1 | Wheat | cytosol | 43.42 | 43.28 |
| TraesCS7B01G260100.1 | Wheat | cytosol | 42.76 | 42.48 |
| TraesCS5B01G427600.1 | Wheat | cytosol, golgi, nucleus | 42.76 | 40.62 |
| TraesCS4B01G067200.1 | Wheat | cytosol | 39.14 | 37.9 |
| TraesCS2B01G238200.2 | Wheat | cytosol | 28.95 | 28.57 |
| TraesCS6B01G175300.1 | Wheat | cytosol | 25.0 | 24.84 |
Protein Annotations
| Gene3D:1.20.5.110 | Gene3D:1.20.58.70 | MapMan:22.7.1.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005484 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016192 | InterPro:IPR000727 | PFAM:PF00804 |
| PFAM:PF05739 | ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 | SMART:SM00397 |
| SMART:SM00503 | InterPro:SNARE | SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | InterPro:Syntaxin_N | TMHMM:TMhelix |
| InterPro:T_SNARE_dom | EnsemblPlantsGene:TraesCS7B01G394300 | EnsemblPlants:TraesCS7B01G394300.1 | TIGR:cd00179 | TIGR:cd15848 | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:661738297..661741620
Molecular Weight (calculated)
34474.6 Da
IEP (calculated)
8.233
GRAVY (calculated)
-0.580
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNLLTDSFE LPRRDSSRDG GDLEMGMHKP DASDNLQAFL KKVDGIDSLI AKLTSLLTKL QSANEESKAV TKASAMKAIK HRMEKDIDEV GKIARMAKTK
101: LDELDKDNLS NRKKPGCEED SAVDRSREQT TGAVKKKLKK RMDDFQVLRE SIRQEYREVV ERRVFTVTGN RPDEETIDDL IETGRSEQIF KDAVQQQGRG
201: QVLDTVAEIQ ERHDAVRDLE RKLLELQQIF LDMAVLVEAQ GDMINHIETH VSNATNHIQQ GVGALQKAKT LQKNSRKWMC YAIILLLVVV AIVVLGVIQP
301: WKKK
101: LDELDKDNLS NRKKPGCEED SAVDRSREQT TGAVKKKLKK RMDDFQVLRE SIRQEYREVV ERRVFTVTGN RPDEETIDDL IETGRSEQIF KDAVQQQGRG
201: QVLDTVAEIQ ERHDAVRDLE RKLLELQQIF LDMAVLVEAQ GDMINHIETH VSNATNHIQQ GVGALQKAKT LQKNSRKWMC YAIILLLVVV AIVVLGVIQP
301: WKKK
001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA
Arabidopsis Description
SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.