Factsheet for GSMUA_Achr2P01540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g056810.2.1	Tomato	cytosol	59.06	69.57
Bra005968.1-P	Field mustard	cytosol	69.8	68.42
Bra009318.1-P	Field mustard	cytosol	69.13	67.99
Bra028672.1-P	Field mustard	cytosol	67.79	66.67
VIT_08s0032g00440.t01	Wine grape	cytosol	68.46	66.45
PGSC0003DMT400072284	Potato	cytosol	67.79	65.16
KRH08507	Soybean	cytosol	67.11	64.94
Solyc10g081580.1.1	Tomato	cytosol, plastid	67.45	64.84
CDY21160	Canola	cytosol	28.86	64.66
AT5G08080.3	Thale cress	cytosol	68.12	64.44
KRH70169	Soybean	cytosol	31.21	63.27
TraesCS2B01G263700.1	Wheat	cytosol	64.09	63.24
TraesCS2D01G248900.1	Wheat	cytosol	64.09	63.24
GSMUA_Achr2P17410_001	Banana	cytosol	62.42	63.05
EER98026	Sorghum	cytosol	64.09	63.04
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	64.09	62.83
AT3G03800.1	Thale cress	cytosol	63.42	61.76
TraesCS7B01G394300.1	Wheat	cytosol	62.75	61.51
CDY51747	Canola	cytosol	27.85	61.48
HORVU6Hr1G095330.1	Barley	cytosol	61.74	61.13
CDY50666	Canola	cytosol	27.52	60.74
TraesCS7A01G481800.1	Wheat	cytosol	61.07	59.87
CDY29963	Canola	cytosol	61.41	59.03
TraesCS5B01G034800.1	Wheat	cytosol	59.73	58.75
Bra031972.1-P	Field mustard	cytosol	55.03	58.57
TraesCS2A01G246600.1	Wheat	cytosol	64.43	57.66
TraesCS5B01G035600.1	Wheat	cytosol	59.4	57.28
Bra036431.1-P	Field mustard	cytosol	53.36	57.19
HORVU2Hr1G057350.2	Barley	cytosol	63.09	57.14
CDY51748	Canola	cytosol	33.89	57.06
CDY50665	Canola	cytosol	33.22	56.9
GSMUA_Achr7P16680_001	Banana	plasma membrane	70.13	55.88
GSMUA_Achr10P...	Banana	cytosol	56.38	55.26
GSMUA_Achr9P24850_001	Banana	cytosol	51.34	54.64
CDY21161	Canola	cytosol	32.55	54.19
Zm00001d018867_P002	Maize	plastid	65.1	49.62
GSMUA_Achr6P31140_001	Banana	cytosol	44.3	48.18
GSMUA_Achr10P...	Banana	cytosol	41.61	44.44
GSMUA_Achr6P04820_001	Banana	cytosol	36.91	43.31
GSMUA_Achr8P03020_001	Banana	cytosol	42.95	41.16
GSMUA_Achr1P25170_001	Banana	cytosol	33.56	40.82
GSMUA_Achr10P...	Banana	cytosol	29.87	32.72
TraesCS5A01G240200.3	Wheat	mitochondrion	21.48	28.96
TraesCS1A01G088800.1	Wheat	cytosol	27.18	28.22

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005484
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016192	GO:GO:0061025	EnsemblPlantsGene:GSMUA_Achr2G01540_001	EnsemblPlants:GSMUA_Achr2P01540_001	EnsemblPlants:GSMUA_Achr2T01540_001	InterPro:IPR000727
UniProt:M0S495	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF153	SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS
InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI0002966025	SEG:seg	:

Description

Putative syntaxin-131 [Source:GMGC_GENE;Acc:GSMUA_Achr2G01540_001]

Coordinates

chr2:+:7389629..7395546

Molecular Weight (calculated)

33550.6 Da

IEP (calculated)

5.911

GRAVY (calculated)

-0.378

Length

298 amino acids

Sequence
(BLAST)

001: MILDSFELPR GEASGYGDVE MGRQISTNSA EMGFEGFFTQ VQDIEKQIEK LSKLLQNLQD ANEESKTVIK AAAMKEIKHR MENDIDEVLR VARTTKTKLE
101: ELDRDNLANR QKPGCGKGSS TDRSRTATTV ALKKKLKEKM SQFQTLRETI QKEYREVIER RVFTVTGTHA NEETIDQLIE TGKGDQIFAK AIQEQGRGQV
201: LDTLAEIQER HDAVRDIEKK LLELQQIFLD MAVLIEAQGE MLDNIEDQVN RAGVFVSSGV NALSKAKILQ KNSRKCMCIA TIILLIIIAV IVLAVIRP

Best Arabidopsis Sequence Match ( AT5G08080.1 )
(BLAST)

001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA

Arabidopsis Description

SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.