Factsheet for GSMUA_Achr10P07900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P17410_001	Banana	cytosol	55.26	56.95
GSMUA_Achr2P01540_001	Banana	cytosol	55.26	56.38
GSMUA_Achr9P24850_001	Banana	cytosol	47.37	51.43
GSMUA_Achr7P16680_001	Banana	plasma membrane	59.87	48.66
GSMUA_Achr6P31140_001	Banana	cytosol	38.82	43.07
GSMUA_Achr10P...	Banana	cytosol	37.5	40.86
GSMUA_Achr6P04820_001	Banana	cytosol	32.24	38.58
GSMUA_Achr1P25170_001	Banana	cytosol	30.59	37.96
GSMUA_Achr8P03020_001	Banana	cytosol	38.49	37.62
GSMUA_Achr10P...	Banana	cytosol	25.33	28.31

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005484
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016192	GO:GO:0061025	EnsemblPlantsGene:GSMUA_Achr10G07900_001	EnsemblPlants:GSMUA_Achr10P07900_001	EnsemblPlants:GSMUA_Achr10T07900_001	InterPro:IPR000727
UniProt:M0RGB6	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF153	SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS
InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI000295EB50	SEG:seg	:

Description

Putative syntaxin-131 [Source:GMGC_GENE;Acc:GSMUA_Achr10G07900_001]

Coordinates

chr10:+:17955142..17956992

Molecular Weight (calculated)

34496.9 Da

IEP (calculated)

5.634

GRAVY (calculated)

-0.470

Length

304 amino acids

Sequence
(BLAST)

001: MEFSQESFER VVGSYPGEGD IGSGRYSTDT RDMGMEGFFK EVGEIDKQIE RITGFFNKLQ ATNEESQLVT KASEMKAIKQ RMEKDVEEVK KIALKIKTML
101: EQLDKNNMIN RQKPGCGKGT AVDRSRMGMT VALKKKLKER MTQFQTLRQN IHEEYREVVE RRVFTVTGTR PDEEMVDQLI ETGNSELIFE KAIQGQGRGQ
201: VVDTLAEIQE RRDTMLELEK KLLDLQQMFL DMSVLVDAQG DMLDDIEAQV TKSVDHIENA TATLQAAKKT QKNTRKYMCI AIVILLVVIV VALGGILKEA
301: KKSV

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.