Factsheet for GSMUA_Achr2P17410_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g056810.2.1	Tomato	cytosol	65.42	76.28
CDY21160	Canola	cytosol	33.9	75.19
CDY51747	Canola	cytosol	34.24	74.81
CDY50666	Canola	cytosol	32.88	71.85
Bra005968.1-P	Field mustard	cytosol	68.81	66.78
VIT_08s0032g00440.t01	Wine grape	cytosol	69.49	66.78
Bra009318.1-P	Field mustard	cytosol	68.47	66.67
Solyc10g081580.1.1	Tomato	cytosol, plastid	68.81	65.48
PGSC0003DMT400072284	Potato	cytosol	68.81	65.48
Bra028672.1-P	Field mustard	cytosol	67.12	65.35
KRH08507	Soybean	cytosol	68.14	65.26
GSMUA_Achr7P16680_001	Banana	plasma membrane	82.71	65.24
AT5G08080.3	Thale cress	cytosol	67.8	63.49
GSMUA_Achr2P01540_001	Banana	cytosol	63.05	62.42
AT3G03800.1	Thale cress	cytosol	62.37	60.13
CDY29963	Canola	cytosol	63.05	60.0
Os06t0168500-01	Rice	plasma membrane	61.36	59.34
EES16084	Sorghum	cytosol	60.34	57.98
HORVU5Hr1G026120.1	Barley	cytosol	60.0	57.84
Zm00001d041716_P002	Maize	cytosol	62.03	57.73
TraesCS5B01G102700.1	Wheat	cytosol	59.66	57.52
Bra031972.1-P	Field mustard	cytosol	54.58	57.5
TraesCS5D01G109500.1	Wheat	cytosol	59.32	57.19
TraesCS5A01G096800.1	Wheat	cytosol	59.32	57.19
Bra036431.1-P	Field mustard	cytosol	53.56	56.83
GSMUA_Achr10P...	Banana	cytosol	56.95	55.26
GSMUA_Achr9P24850_001	Banana	cytosol	49.49	52.14
KRH70169	Soybean	cytosol	25.76	51.7
CDY51748	Canola	cytosol	29.83	49.72
CDY50665	Canola	cytosol	28.47	48.28
CDY21161	Canola	cytosol	29.15	48.04
GSMUA_Achr6P31140_001	Banana	cytosol	43.39	46.72
GSMUA_Achr1P25170_001	Banana	cytosol	35.59	42.86
GSMUA_Achr10P...	Banana	cytosol	40.34	42.65
GSMUA_Achr6P04820_001	Banana	cytosol	36.27	42.13
GSMUA_Achr8P03020_001	Banana	cytosol	42.37	40.19
GSMUA_Achr10P...	Banana	cytosol	26.78	29.04

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005484
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016192	GO:GO:0061025	EnsemblPlantsGene:GSMUA_Achr2G17410_001	EnsemblPlants:GSMUA_Achr2P17410_001	EnsemblPlants:GSMUA_Achr2T17410_001	InterPro:IPR000727
UniProt:M0S8T2	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF153	SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS
InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI000296DE08	SEG:seg	:

Description

Putative syntaxin-131 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17410_001]

Coordinates

chr2:-:17971324..17977450

Molecular Weight (calculated)

33855.0 Da

IEP (calculated)

9.336

GRAVY (calculated)

-0.469

Length

295 amino acids

Sequence
(BLAST)

001: MLILFIDFKY CDHNNLHLNP LKTQYSWELK DYHVYDAKRN HTRFSCHLPL QAANEKSKSV TKASDMKAIK QHMQKEIDEV GKIARLAKSN LEELDRDNLA
101: SRQKPGCGKG SSVDRSRTAT TVALKKKLKE RMSEFQTLRE TIHQEYREVV ERRIFTVTGN RADEETIDRL IETGNSEQIF QKAIQEQGRG QVMDTLAEIQ
201: ERHNTVKDLE RKLLELQQIF LDMAVLVDAQ GEMLDNIESQ VSSAVDHVQS GTVALQKAKK LQKNSRKWMC IAIIILLLIV VIIVVAVIKP WSKGT

Best Arabidopsis Sequence Match ( AT5G08080.3 )
(BLAST)

001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQI YDSVASQLPC ASHEESKSVT KAPAMKAIKK TMEKDVDEVG
101: SIARFIKGKL EELDRENLAN RQKPGCAKGS GVDRSRTATT LSLKKKLKDK MAEFQVLREN IQQEYRDVVD RRVYTVTGER ADEDTIDELI ETGNSEQIFQ
201: KAIQEQGRGQ VMDTLAEIQE RHDAVRDLEK KLLDLQQIFL DMAVLVDAQG EMLDNIESQV SSAVDHVQSG NTALQRAKSL QKNSRKWMCI AIIILLIVVA
301: VIVVGVLKPW KNKSA

Arabidopsis Description

SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.