Factsheet for GSMUA_Achr9P24850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G045350.3	Barley	cytosol	63.93	61.09
TraesCS2B01G244700.1	Wheat	cytosol	65.0	60.07
TraesCS2D01G224100.1	Wheat	cytosol	64.64	59.74
TraesCS2A01G219200.1	Wheat	cytosol	64.64	59.74
EER97312	Sorghum	cytosol	61.79	56.72
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	61.79	56.54
VIT_12s0059g02340.t01	Wine grape	cytosol	60.71	55.92
KRH26811	Soybean	cytosol	61.07	55.88
Os07t0528900-00	Rice	cytosol, extracellular, plasma membrane	20.36	51.35
GSMUA_Achr2P01540_001	Banana	cytosol	54.64	51.34
Solyc07g052470.2.1	Tomato	cytosol	55.36	50.82
GSMUA_Achr2P17410_001	Banana	cytosol	52.14	49.49
PGSC0003DMT400065519	Potato	cytosol	54.64	49.04
GSMUA_Achr10P...	Banana	cytosol	51.43	47.37
Zm00001d021664_P001	Maize	cytosol	57.14	44.94
GSMUA_Achr7P16680_001	Banana	plasma membrane	57.86	43.32
GSMUA_Achr6P31140_001	Banana	cytosol	38.21	39.05
GSMUA_Achr8P03020_001	Banana	cytosol	38.57	34.73
GSMUA_Achr6P04820_001	Banana	cytosol	30.71	33.86
GSMUA_Achr10P...	Banana	cytosol	33.57	33.69
GSMUA_Achr1P25170_001	Banana	cytosol	29.29	33.47
TraesCS2B01G238200.2	Wheat	cytosol	31.43	28.57
GSMUA_Achr10P...	Banana	cytosol	27.14	27.94
HORVU2Hr1G043130.15	Barley	cytosol	30.71	27.39
TraesCS2A01G213400.1	Wheat	cytosol	24.64	25.75
TraesCS2D01G219400.1	Wheat	cytosol	31.79	25.65

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	ncoils:Coil	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	EnsemblPlantsGene:GSMUA_Achr9G24850_001	EnsemblPlants:GSMUA_Achr9P24850_001
EnsemblPlants:GSMUA_Achr9T24850_001	InterPro:IPR000727	UniProt:M0U392	PFAM:PF00804	PFAM:PF05739	PFscan:PS50192
PANTHER:PTHR19957	PANTHER:PTHR19957:SF153	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin_N
TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI000295E5FB	SEG:seg	:	:

Description

Putative syntaxin-131 [Source:GMGC_GENE;Acc:GSMUA_Achr9G24850_001]

Coordinates

chr9:-:29518145..29520833

Molecular Weight (calculated)

31886.6 Da

IEP (calculated)

9.096

GRAVY (calculated)

-0.497

Length

280 amino acids

Sequence
(BLAST)

001: MSTSQSPKVR DVELGSLHSD NTSDYGMEDF FKQVTGIEKM MEKISNHLKK LQEANENSKS ATKASSMKKI RQQMEKDVDE VGKIAHMIKT KLQEIDRDNL
101: ANRKKPGCEK GTGVDRSRMA LTAALKKKSK DRMNDFQNLR KTIQDENREV VERAVFTVTG TLPTDEMIDR LIATGNNEQI FQRQFKKWHV FQIIDIIEEI
201: QERNDAVFMD MAVLVEAQEE ILDNIESQVA TAMNHVQSGN NELLTAKSLS KRSRKCMFIA IVILLAIAAV IVLSILKPWK

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.