Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G238200.2 | Wheat | cytosol | 81.72 | 71.1 |
| TraesCS2D01G219400.1 | Wheat | cytosol | 83.58 | 64.55 |
| HORVU2Hr1G043130.15 | Barley | cytosol | 64.18 | 54.78 |
| EER97312 | Sorghum | cytosol | 30.6 | 26.89 |
| TraesCS2A01G219200.1 | Wheat | cytosol | 28.73 | 25.41 |
| GSMUA_Achr9P24850_001 | Banana | cytosol | 25.75 | 24.64 |
| Os07t0528900-00 | Rice | cytosol, extracellular, plasma membrane | 9.7 | 23.42 |
| TraesCS7A01G481800.1 | Wheat | cytosol | 26.49 | 23.36 |
| Zm00001d021664_P001 | Maize | cytosol | 30.22 | 22.75 |
| VIT_12s0059g02340.t01 | Wine grape | cytosol | 25.75 | 22.7 |
| TraesCS5A01G096800.1 | Wheat | cytosol | 25.0 | 21.9 |
| KRH26811 | Soybean | cytosol | 24.63 | 21.57 |
| KRH22542 | Soybean | endoplasmic reticulum, extracellular, mitochondrion | 24.63 | 21.57 |
| PGSC0003DMT400065519 | Potato | cytosol | 25.0 | 21.47 |
| Solyc07g052470.2.1 | Tomato | cytosol | 24.25 | 21.31 |
| TraesCS2A01G246600.1 | Wheat | cytosol | 25.37 | 20.42 |
| TraesCS7A01G368400.1 | Wheat | cytosol | 21.27 | 18.63 |
| TraesCS5A01G425600.1 | Wheat | cytosol, nucleus, plastid | 22.01 | 18.61 |
| TraesCS4A01G247700.1 | Wheat | cytosol | 20.15 | 17.09 |
| TraesCS6A01G182200.1 | Wheat | cytosol | 21.27 | 15.08 |
| TraesCS6A01G147100.1 | Wheat | cytosol | 15.3 | 13.4 |
| TraesCS1A01G088800.1 | Wheat | cytosol | 11.57 | 10.8 |
| TraesCS5A01G240200.3 | Wheat | mitochondrion | 6.72 | 8.14 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G213400.1 | EnsemblPlantsGene:TraesCS2A01G213400 | Gene3D:1.20.5.110 | ncoils:Coil | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF153 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:198743445..198745635
Molecular Weight (calculated)
29937.9 Da
IEP (calculated)
10.314
GRAVY (calculated)
-0.247
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDLPPAAAM GGERDIELGL PTTNTTSGYT RQHILEDIRQ FSTLLGSTPT MLHKLKKANE ELKSAAESAA VKEIRGRMEK DMDEAAKMAR IMKEKLSRIF
101: PRALKMKLKE RKKDLKVIRV IDTSSIMQIF EHRVHGIGPE QASAIGEEIK ERRAAAMDLG KKAVEVQKNF REMLALVKAQ EKIVKALSQV RQSAEARARS
201: IAENLARARS RVEELRQEME ETKLLIALVV ILFLLCIVAV THGISGDHLR SSTCSYLVLP LHGTQLGF
101: PRALKMKLKE RKKDLKVIRV IDTSSIMQIF EHRVHGIGPE QASAIGEEIK ERRAAAMDLG KKAVEVQKNF REMLALVKAQ EKIVKALSQV RQSAEARARS
201: IAENLARARS RVEELRQEME ETKLLIALVV ILFLLCIVAV THGISGDHLR SSTCSYLVLP LHGTQLGF
001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA
Arabidopsis Description
SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.