Factsheet for TraesCS5A01G240200.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G088800.1	Wheat	cytosol	50.23	38.68
KRH70169	Soybean	cytosol	20.36	30.61
CDY51748	Canola	cytosol	23.98	29.94
CDY50665	Canola	cytosol	23.08	29.31
CDY21161	Canola	cytosol	23.53	29.05
Solyc01g056810.2.1	Tomato	cytosol	29.41	25.69
EER98026	Sorghum	cytosol	33.94	24.75
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	33.94	24.67
TraesCS5B01G034800.1	Wheat	cytosol	33.48	24.42
TraesCS2A01G246600.1	Wheat	cytosol	35.29	23.42
TraesCS7A01G481800.1	Wheat	cytosol	32.13	23.36
TraesCS5B01G035600.1	Wheat	cytosol	32.13	22.98
VIT_08s0032g00440.t01	Wine grape	cytosol	31.67	22.8
PGSC0003DMT400072284	Potato	cytosol	30.77	21.94
Solyc10g081580.1.1	Tomato	cytosol, plastid	30.77	21.94
Bra005968.1-P	Field mustard	cytosol	29.86	21.71
GSMUA_Achr2P01540_001	Banana	cytosol	28.96	21.48
Bra028672.1-P	Field mustard	cytosol	29.41	21.45
Bra009318.1-P	Field mustard	cytosol	29.41	21.45
KRH08507	Soybean	cytosol	29.86	21.43
AT3G03800.1	Thale cress	cytosol	28.96	20.91
AT5G08080.3	Thale cress	cytosol	28.51	20.0
CDY29963	Canola	cytosol	27.6	19.68
TraesCS5A01G096800.1	Wheat	cytosol	26.7	19.28
Zm00001d018867_P002	Maize	plastid	33.94	19.18
TraesCS2A01G219200.1	Wheat	cytosol	25.79	18.81
TraesCS5A01G425600.1	Wheat	cytosol, nucleus, plastid	22.17	15.46
TraesCS7A01G368400.1	Wheat	cytosol	21.27	15.36
Bra031972.1-P	Field mustard	cytosol	18.55	14.64
Bra036431.1-P	Field mustard	cytosol	17.19	13.67
TraesCS4A01G247700.1	Wheat	cytosol	18.55	12.97
TraesCS6A01G182200.1	Wheat	cytosol	19.46	11.38
TraesCS6A01G147100.1	Wheat	cytosol	11.31	8.17
CDY21160	Canola	cytosol	4.52	7.52
CDY51747	Canola	cytosol	4.52	7.41
CDY50666	Canola	cytosol	4.52	7.41
TraesCS2A01G213400.1	Wheat	cytosol	8.14	6.72

Protein Annotations

EnsemblPlants:TraesCS5A01G240200.3	EnsemblPlantsGene:TraesCS5A01G240200	Gene3D:1.20.58.70	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016192	InterPro:SNARE	InterPro:Syntaxin_N	PANTHER:PTHR19957	PANTHER:PTHR19957:SF153
PFAM:PF00804	SEG:seg	SUPFAM:SSF47661	MapMan:22.7.1.1	:	:

Description

No Description!

Coordinates

chr5A:-:456524304..456526236

Molecular Weight (calculated)

25289.7 Da

IEP (calculated)

9.830

GRAVY (calculated)

-0.439

Length

221 amino acids

Sequence
(BLAST)

001: MSMCWRWRRR RRAQLEVAHP CVGVVDGDQL TTGMQRLRSG LLRGHGAMAR RIHNARVNAS VGLDLYSFNT LIRGCGQVIW SVHGRCSMVR SLGSYEEKCG
101: LCYSLFRFLH LLVFYIQSSG KYEMNLPNMQ KPGCGKGSAV DRSREQTIGA VKKKMKEQMD DFQVMRESIG QEYREVVERR VFTVTGNRLD EETIDGLIET
201: GRSEQIFKDA VQQQGRAQVY I

Best Arabidopsis Sequence Match ( AT3G03800.1 )
(BLAST)

001: MNDLLKGSLE FSRDRSNRSD IESGHGPGNS GDLGLSGFFK KVQEIEKQYE KLDKHLNKLQ GAHEETKAVT KAPAMKSIKQ RMERDVDEVG RISRFIKGKI
101: EELDRENLEN RTKPGCGKGT GVDRTRTATT IAVKKKFKDK ISEFQTLRQN IQQEYREVVE RRVFTVTGQR ADEETVDRLI ETGDSEQIFQ KAIREQGRGQ
201: IMDTLAEIQE RHDAVRDLEK KLLDLQQVFL DMAVLVDAQG EMLDNIENMV SSAVDHVQSG NNQLTKAVKS QKSSRKWMCI AILILLIIII ITVISVLKPW
301: TQKNGA

Arabidopsis Description

SYP131Syntaxin of plants 131 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQP3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.