Factsheet for Bra028672.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009318.1-P	Field mustard	cytosol	96.37	96.37
Bra005968.1-P	Field mustard	cytosol	95.05	94.74
AT5G08080.3	Thale cress	cytosol	91.42	87.94
Solyc01g056810.2.1	Tomato	cytosol	66.67	79.84
PGSC0003DMT400072284	Potato	cytosol	78.22	76.45
Solyc10g081580.1.1	Tomato	cytosol, plastid	78.22	76.45
Bra031972.1-P	Field mustard	cytosol	67.66	73.21
Bra036431.1-P	Field mustard	cytosol	66.01	71.94
GSMUA_Achr2P01540_001	Banana	cytosol	66.67	67.79
GSMUA_Achr2P17410_001	Banana	cytosol	65.35	67.12
EER98026	Sorghum	cytosol	66.34	66.34
TraesCS2B01G263700.1	Wheat	cytosol	65.68	65.89
TraesCS2D01G248900.1	Wheat	cytosol	65.68	65.89
TraesCS7B01G394300.1	Wheat	cytosol	66.01	65.79
Zm00001d007902_P001	Maize	mitochondrion, plasma membrane	66.01	65.79
TraesCS7A01G481800.1	Wheat	cytosol	64.36	64.14
HORVU6Hr1G095330.1	Barley	cytosol	63.7	64.12
HORVU5Hr1G026120.1	Barley	cytosol	64.03	63.4
TraesCS5A01G096800.1	Wheat	cytosol	62.38	61.76
TraesCS5D01G109500.1	Wheat	cytosol	62.38	61.76
Os06t0168500-01	Rice	plasma membrane	62.05	61.64
TraesCS5B01G102700.1	Wheat	cytosol	62.05	61.44
TraesCS5B01G034800.1	Wheat	cytosol	61.39	61.39
TraesCS5B01G035600.1	Wheat	cytosol	60.73	59.55
EES16084	Sorghum	cytosol	60.07	59.28
TraesCS2A01G246600.1	Wheat	cytosol	65.02	59.16
GSMUA_Achr7P16680_001	Banana	plasma membrane	72.94	59.09
Zm00001d041716_P002	Maize	cytosol	61.72	58.99
HORVU2Hr1G057350.2	Barley	cytosol	64.03	58.97
Bra031761.1-P	Field mustard	cytosol	29.04	53.33
Zm00001d018867_P002	Maize	plastid	66.01	51.15
Bra031760.1-P	Field mustard	cytosol, nucleus, plasma membrane	16.83	49.04
Bra034202.1-P	Field mustard	cytosol	48.84	48.52
Bra031759.1-P	Field mustard	cytosol	46.53	47.32
Bra016846.1-P	Field mustard	cytosol	46.2	46.98
Bra019872.1-P	Field mustard	cytosol	46.2	46.98
Bra001422.1-P	Field mustard	cytosol	48.84	44.44
Bra034808.1-P	Field mustard	cytosol, nucleus, plastid	47.52	44.31
Bra033436.1-P	Field mustard	cytosol	47.85	42.4
Bra012806.1-P	Field mustard	cytosol, nucleus, peroxisome	42.24	41.56
Bra030733.1-P	Field mustard	cytosol	36.63	36.51
Bra018615.1-P	Field mustard	cytosol	36.96	36.48
Bra039622.1-P	Field mustard	cytosol	30.03	31.6
TraesCS1A01G088800.1	Wheat	cytosol	29.04	30.66
Bra024476.1-P	Field mustard	cytosol	28.38	30.07
TraesCS5A01G240200.3	Wheat	mitochondrion	21.45	29.41

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	MapMan:22.7.1.1	EnsemblPlantsGene:Bra028672	EnsemblPlants:Bra028672.1	EnsemblPlants:Bra028672.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	InterPro:IPR000727
UniProt:M4EIQ7	PFAM:PF00804	PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957
PANTHER:PTHR19957:SF153	SMART:SM00397	SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS
InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI0002543264	SEG:seg	:

Description

AT5G08080 (E=4e-123) SYP132, ATSYP132 | SYP132 (SYNTAXIN OF PLANTS 132); SNAP receptor

Coordinates

chrA02:+:2614152..2616502

Molecular Weight (calculated)

34188.2 Da

IEP (calculated)

6.814

GRAVY (calculated)

-0.558

Length

303 amino acids

Sequence
(BLAST)

001: MNDLLKGSFE LPRGESSRQS DVELGEQGGD QGLDEFFKKV QDIDKQYEKL NKLLKKLQAA HEESKAVTKA PAMKAIKKKM EKDVDEVGSI ARFIKGKLEE
101: LDKENLANRQ KPGCGKGSGV DRSRTSTTLS LKKKFKDKMA EFQVLRENIQ QEYREVVDRR IFTVTGQRAD EDTIDELIET GNSEQIFQKA IQEQGRGQVM
201: DTLAEIQERH DAVRDLEKKL LDLQQIFMDM AVLVDAQGEM LDNIESQVSN AVDHVQSGNT ALVRAKSLQK SSRKWMCIAI IILLIVVAVI VVGVLKPWQN
301: KNA

Best Arabidopsis Sequence Match ( AT5G08080.1 )
(BLAST)

001: MNDLLKGSFE LPRGQSSREG DVELGEQQGG DQGLEDFFKK VQVIDKQYDK LDKLLKKLQA SHEESKSVTK APAMKAIKKT MEKDVDEVGS IARFIKGKLE
101: ELDRENLANR QKPGCAKGSG VDRSRTATTL SLKKKLKDKM AEFQVLRENI QQEYRDVVDR RVYTVTGERA DEDTIDELIE TGNSEQIFQK AIQEQGRGQV
201: MDTLAEIQER HDAVRDLEKK LLDLQQIFLD MAVLVDAQGE MLDNIESQVS SAVDHVQSGN TALQRAKSLQ KNSRKWMCIA IIILLIVVAV IVVGVLKPWK
301: NKSA

Arabidopsis Description

SYP132Syntaxin of plants 132 [Source:UniProtKB/TrEMBL;Acc:F4K9K2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.