Factsheet for Bra031761.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031760.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.03	100.0
Bra031759.1-P	Field mustard	cytosol	98.79	54.7
CDY34656	Canola	cytosol	98.18	54.36
Bra016846.1-P	Field mustard	cytosol	97.58	54.03
AT1G11250.1	Thale cress	cytosol	95.76	53.02
Bra019872.1-P	Field mustard	cytosol	95.76	53.02
KRH10761	Soybean	cytosol	83.64	45.39
KRH21567	Soybean	cytosol	83.03	45.07
KRH41917	Soybean	cytosol	80.61	43.75
GSMUA_Achr10P...	Banana	cytosol	70.91	41.94
VIT_12s0059g02060.t01	Wine grape	cytosol	76.36	41.31
Solyc12g005580.1.1	Tomato	cytosol	76.97	40.97
PGSC0003DMT400035739	Potato	cytosol	75.76	40.32
PGSC0003DMT400055777	Potato	cytosol	75.76	40.19
Bra034202.1-P	Field mustard	cytosol	70.91	38.36
GSMUA_Achr6P04820_001	Banana	cytosol	58.79	38.19
Zm00001d036931_P001	Maize	cytosol	70.91	37.86
Zm00001d046482_P001	Maize	cytosol	70.91	37.86
EER89986	Sorghum	cytosol	70.91	37.86
TraesCS6D01G169800.1	Wheat	cytosol	68.48	37.05
TraesCS6B01G211000.1	Wheat	cytosol	68.48	37.05
TraesCS7B01G260100.1	Wheat	cytosol	68.48	36.93
Os02t0209900-01	Rice	cytosol	69.09	36.66
TraesCS7A01G368400.1	Wheat	cytosol	67.27	36.27
TraesCS7D01G354500.1	Wheat	cytosol	66.67	35.95
EES06503	Sorghum	cytosol	64.24	33.65
Zm00001d053607_P001	Maize	cytosol	61.21	32.27
Bra001422.1-P	Field mustard	cytosol	63.03	31.23
TraesCS6A01G182200.1	Wheat	cytosol	67.88	29.63
Bra028672.1-P	Field mustard	cytosol	53.33	29.04
Bra009318.1-P	Field mustard	cytosol	53.33	29.04
Bra005968.1-P	Field mustard	cytosol	53.33	28.95
Bra034808.1-P	Field mustard	cytosol, nucleus, plastid	56.97	28.92
Bra012806.1-P	Field mustard	cytosol, nucleus, peroxisome	53.94	28.9
Bra033436.1-P	Field mustard	cytosol	59.39	28.66
Bra018615.1-P	Field mustard	cytosol	52.12	28.01
Bra030733.1-P	Field mustard	cytosol	50.91	27.63
Bra036431.1-P	Field mustard	cytosol	43.03	25.54
Bra031972.1-P	Field mustard	cytosol	43.03	25.36
Bra039622.1-P	Field mustard	cytosol	34.55	19.79
Bra024476.1-P	Field mustard	cytosol	33.94	19.58
HORVU7Hr1G085550.1	Barley	cytosol	15.15	7.94
HORVU6Hr1G038490.4	Barley	nucleus	13.33	6.98

Protein Annotations

Gene3D:1.20.58.70	MapMan:22.7.1.1	EnsemblPlantsGene:Bra031761	EnsemblPlants:Bra031761.1	EnsemblPlants:Bra031761.1-P	GO:GO:0003674
GO:GO:0005484	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0016192	GO:GO:0061025	InterPro:IPR000727	UniProt:M4ESI2	PFAM:PF00804
PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF80	SMART:SM00397
InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N	TMHMM:TMhelix	InterPro:T_SNARE_dom
UniParc:UPI00025430DD	SEG:seg	:	:	:	:

Description

AT1G11250 (E=4e-075) SYP125, ATSYP125 | SYP125 (SYNTAXIN OF PLANTS 125); SNAP receptor

Coordinates

chrA09:-:34865579..34866168

Molecular Weight (calculated)

19075.9 Da

IEP (calculated)

4.900

GRAVY (calculated)

-0.328

Length

165 amino acids

Sequence
(BLAST)

001: MDSFQGLRSR MNDEYKETVE RRYFTITGEQ ADEQTIDNLI ASGESENFLQ KAIQEQGRGQ IMDTISEIQE RHDAVKEIEK NLLELHQVFL DMAALVEAQG
101: QQLNNIESHV AKASSFVRRG TEQLQDAREY QKSSRKWTCY AIILFIVVFI LLLIPALPHI MLMLK

Best Arabidopsis Sequence Match ( AT1G11250.1 )
(BLAST)

001: MNDLFSNSFK KNQAQLGDVE AGQETMNLDK FFEDVENVKD DMKGVEALYK KLQDSNEECK TVHNAKKVKE LRAKMDGDVA MVLKRVKIIK QKLEALEKAN
101: ANSRNVPGCG PGSSTDRTRS SVVSGLGKKL KDLMDSFQGL RARMNNEYKE TVERRYFTIT GEKADEQTID NLIASGESEN FLQKAIQEQG RGQILDTISE
201: IQERHDAVKE IEKNLLELHQ VFLDMAALVE AQGQQLNNIE SHVAKASSFV RRGTDQLQDA REYQKSSRKW TCYAIILFIV IFILLLIPLL PHIMLMLK

Arabidopsis Description

SYP125Syntaxin-125 [Source:UniProtKB/Swiss-Prot;Acc:Q9SXB0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.