CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10761	Soybean	cytosol	98.68	98.68
KRH41917	Soybean	cytosol	88.16	88.16
Bra031761.1-P	Field mustard	cytosol	45.07	83.03
Bra031760.1-P	Field mustard	cytosol, nucleus, plasma membrane	28.29	82.69
VIT_12s0059g02060.t01	Wine grape	cytosol	80.59	80.33
AT1G61290.2	Thale cress	cytosol	78.95	79.21
AT1G11250.1	Thale cress	cytosol	77.63	79.19
CDY20986	Canola	cytosol	76.64	78.19
CDY34843	Canola	cytosol	76.64	78.19
CDY34656	Canola	cytosol	76.32	77.85
CDX97943	Canola	cytosol	75.99	77.52
CDY19350	Canola	cytosol	75.99	77.52
Bra031759.1-P	Field mustard	cytosol	75.99	77.52
Bra016846.1-P	Field mustard	cytosol	75.99	77.52
Bra019872.1-P	Field mustard	cytosol	75.99	77.52
CDY70107	Canola	cytosol	75.66	77.18
Solyc12g005580.1.1	Tomato	cytosol	78.29	76.77
PGSC0003DMT400035739	Potato	cytosol	77.63	76.13
PGSC0003DMT400055777	Potato	cytosol	76.32	74.6
Zm00001d046482_P001	Maize	cytosol	71.05	69.9
EER89986	Sorghum	cytosol	70.72	69.58
Zm00001d036931_P001	Maize	cytosol	70.07	68.93
GSMUA_Achr6P04820_001	Banana	cytosol	57.57	68.9
TraesCS6D01G169800.1	Wheat	cytosol	68.42	68.2
GSMUA_Achr10P...	Banana	cytosol	62.5	68.1
TraesCS6B01G211000.1	Wheat	cytosol	68.09	67.87
Os02t0209900-01	Rice	cytosol	68.09	66.56
TraesCS7B01G260100.1	Wheat	cytosol	66.45	66.01
TraesCS7A01G368400.1	Wheat	cytosol	66.12	65.69
TraesCS7D01G354500.1	Wheat	cytosol	65.79	65.36
EES06503	Sorghum	cytosol	66.45	64.13
Zm00001d053607_P001	Maize	cytosol	65.13	63.26
KRH72168	Soybean	cytosol	57.89	57.7
KRH32862	Soybean	cytosol	57.24	56.86
KRH72169	Soybean	cytosol	61.84	56.12
KRH32861	Soybean	mitochondrion	61.18	56.02
TraesCS6A01G182200.1	Wheat	cytosol	68.75	55.29
KRG96271	Soybean	cytosol, golgi, mitochondrion	49.67	50.17
KRH68016	Soybean	cytosol	46.38	47.96
KRH08461	Soybean	cytosol	49.67	46.89
KRH70119	Soybean	cytosol	49.01	46.86
KRH08507	Soybean	cytosol	45.39	44.81
KRH70169	Soybean	cytosol	21.38	44.22
KRH26811	Soybean	cytosol	44.41	44.12
KRH22542	Soybean	endoplasmic reticulum, extracellular, mitochondrion	44.41	44.12
KRH28699	Soybean	cytosol	39.8	40.47
KRH76768	Soybean	cytosol	39.47	40.13
HORVU6Hr1G038490.4	Barley	nucleus	37.83	36.51
HORVU7Hr1G085550.1	Barley	cytosol	35.86	34.6
KRH59335	Soybean	cytosol	15.46	30.92
KRH43180	Soybean	cytosol	24.67	29.18

Protein Annotations

Gene3D:1.20.5.110	Gene3D:1.20.58.70	EntrezGene:100781569	MapMan:22.7.1.1	EMBL:ACUP02008360	ncoils:Coil
EnsemblPlantsGene:GLYMA_13G245800	GO:GO:0000149	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886	GO:GO:0006810
GO:GO:0006886	GO:GO:0006887	GO:GO:0006906	GO:GO:0008150	GO:GO:0009987	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0031201	GO:GO:0048278
UniProt:I1M2C2	InterPro:IPR000727	EnsemblPlants:KRH21567	ProteinID:KRH21567	ProteinID:KRH21567.1	PFAM:PF00804
PFAM:PF05739	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF198	SMART:SM00397
SMART:SM00503	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N	TMHMM:TMhelix
InterPro:T_SNARE_dom	UniParc:UPI000233B0D5	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:35479651..35480866

Molecular Weight (calculated)

34845.5 Da

IEP (calculated)

6.022

GRAVY (calculated)

-0.588

Length

304 amino acids

Sequence
(BLAST)

001: MNDLFSSSFK KYSDLKEQSH IDDVEAGKES VNLDKFFDEV ENVKEDMRLV EKLYRKLQES NEESKIVHNA KTMKDLRARM DQDVQQVLKR VKLIKGKLES
101: LERSNAANRN IPGCGPGSSA DRTRTSVVSG LGKKLKDLMD DFQGLRARMQ NEYKETVERR YFTITGEKAD EDTIENLISS GESESFLQRA IQEQGRGQIM
201: DTISEIQERH DAVKEIEKNL IELHQVFLDM AALVESQGQQ LNNIESHVAR ASSFVRRGTE QLQDAREYQK SSRKWTCYAI LLGIVLVVVL LFPLLTSLLP
301: HLLY

Best Arabidopsis Sequence Match ( AT1G61290.1 )
(BLAST)

001: MNDLFSSSFK KYTDLKQQAQ MDDIESGKET MNLDKFFEDV ENVKDNMKGV ETLYKSLQDS NEECKTVHNA KKVKELRAKM DGDVAQVLKR VKMIKQKLEA
101: LEKANANSRN VSGCGPGSST DRTRTSVVSG LGKKLKDLMD SFQGLRARMN AEYKETVERR YFTITGEQAD EQTIENLISS GESENFLQKA IQEQGRGQIL
201: DTISEIQERH DAVKEIEKNL IELHQVFLDM AALVESQGQQ LNDIESHVSK ASSFVRRGTD QLQDAREYQK SSRKWTCYAI LLFIVVFALL LIPALPHIML
301: MLK

Arabidopsis Description

SYP124Syntaxin-124 [Source:UniProtKB/Swiss-Prot;Acc:O64791]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.